Difference between revisions of "Mohid Bibliography"

Revision as of 20:49, 27 June 2014

Journal Papers By Author

A-E

Arifin T, Y Y, Ismail MFA. Kondisi arus pasang surut di perairan pesisir kota Makassar, Sulawesi Selatan. Tidal currents condition in Makassar waters, South Sulawesi. Depik. 2012; 1(3): 183-188. Available at: [Link] (In Indonesian).

Ballent A, Pando S, Purser A, Juliano MF, Thomsen L. Modelled transport of benthic marine microplastic pollution in the Nazaré Canyon. Biogeosciences. 2013; 10: 7957-7970. Available at: [Link].

Balseiro CF, Carracedo P, Gómez B, Leitão P, Montero P, Naranjo L, Penabad E, Pérez-Muñuzuri V. Tracking the Prestige oil spill: An operational experience in simulation at MeteoGalicia. Weather. 2003; 58: 452–458. Available at: [Link].

Beckers PM, Neves RJ. A semi-implicit tidal model of the North European Continental Shelf. Applied Mathematical Modelling. 1985; 9(6): 395-402. Available at: [Link].

Braunschweig F, Martins F, Chambel P, Neves R. A methodology to estimate renewal time scales in estuaries: the Tagus Estuary case. Ocean Dynamics. 2003; 53(3): 137-145. Available at: [Link].

Brock TD. Calculating solar radiation for ecological studies. Ecological Modelling, 1981; 14(1–2): 1-19. Available at: [Link].

Brown SL, Cox R, Feunteun E, Thorin S, Lefeuvre JC. Overview of the EUROSAM project and a Decision Support System. Continental Shelf Research. 2003; 23: 1617-1634. Available at: [Link].

Campuzano FJ, Mateus MD, Leitão PC, Leitão PC, Marín VH, Delgado LE, Tironi A, Pierini JO, Sampaio AFP, Almeida P, Neves RJ. Integrated coastal zone management in South America: A look at three contrasting systems. Ocean & Coastal Management. 2013; 72: 22-35. Available at: [Link].

Campuzano FJ, Pierini JO, Leitão PC, Gómez EA, Neves RJ. Characterization of the Bahia Blanca estuary by data analysis and numerical modelling. Journal of Marine Systems. 2014; 129: 415-424. Available at: [Link].

Campuzano F, Nunes S, Malhadas M, Neves R. Modelling hydrodynamics and water quality of Madeira Island (Portugal). GLOBEC International Newsletter. 2010; 16(1): 40-42. [Download].

Canas A, Santos A, Leitão P. Effect of large scale atmospheric pressure changes on water level in the Tagus Estuary. Journal of Coastal Research. 2009; SI(56): 1627-1631. Available at: [Link].

Cancino L, Neves R. Hydrodynamic and sediment suspension modelling in estuarine systems Part I: Description of the numerical models. Journal of Marine Systems. 1999; 22(2-3): 105-116. Available at: [Link].

Cancino L, Neves R. Hydrodynamic and sediment suspension modelling in estuarine systems Part II: Application to the Western Scheldt and Gironde estuaries. Journal of Marine Systems. 1999; 22(2-3): 117-131. Available at: [Link].

Carracedo P, Torres-López S, Barreiro M, Montero P, Balseiro CF, Penabad E, Leitao PC, Pérez-Muñuzuri V. Improvement of pollutant drift forecast system applied to the Prestige oil spills in Galicia Coast (NW of Spain): development of an operational system. Marine Pollution Bulletin. 2006; 53(5-7): 350-360. Available at: [Link].

Cho K-H, Choi J-Y, Jeong S-H, Choi J-W, Kwon J-I, Park K-S. Development of a skill assessment tool for the Korea operational oceanographic system. Acta Oceanologica Sinica. 2013; 32(9): 74-81. Available at: [Link].

Cho K-H, Li Y, Wang H, Park K-S, Choi J-Y, Shin K-I, Kwon J-I. Development and validation of an operational search and rescue modeling system for the Yellow Sea and the East and South China Seas. Journal of Atmospheric and Oceanic Technology. 2014; 31: 197–215. Available at: [Link].

Choi J-Y, Park J-Y, Cho K-H, Hyun S-K, Yoo J, Lee D-Y and Jun K-C. Field observation and modeling of wave set-up on a macrotidal beach: the Malipo Experiment. Journal of Coastal Research, Special Issue No. 65, 2013. Available at:[Link].

Coelho HS, Neves RR, Leitão PC, Martins H, Santos AP. The slope current along the western European margin : A numerical investigation. Bol. Inst. Esp. Oceanogr. 1999; 15(1-4): 61-72. Available at: [Link].

Coelho H, Neves R, White M, Leitao P, Santos A. A model for ocean circulation on the Iberian coast. Journal of Marine Systems. 2002; 32(1-3): 153-179. Available at: [Link].

Deus R, Brito D, Kenov IA, Lima M, Costa V, Medeiros A, Neves R, Alves CN. Three-dimensional model for analysis of spatial and temporal patterns of phytoplankton in Tucuruí reservoir, Pará, Brazil. Ecological Modelling. 2013; 253: 28-43. Available at: [Link].

deCastro M, Gómez-Gesteira M, Alvarez I, Prego R. Negative estuarine circulation in the Ria of Pontevedra (NW Spain). Estuarine, Coastal and Shelf Science. 2004; 60(2): 301-312. Available at: [Link].

deCastro M, Gómez-Gesteira M, Prego R, Neves R. Wind influence on water exchange between the ria of Ferrol (NW Spain) and the shelf. Estuarine, Coastal and Shelf Science. 2003; 56(5-6): 1055-1064. Available at: [Link].

Delpey MT, Ardhuin F, Otheguy P, Jouon A. Effects of waves on coastal water dispersion in a small estuarine bay. Journal of Geophysical Research: Oceans. 2014; 119: 1–17. Available at: [Link].

F-J

Fossati M, Piedra-Cueva I. A 3D hydrodynamic numerical model of the Río de la Plata and Montevideo’s coastal zone. Applied Mathematical Modelling. 2013; 37(3):1310-1332. Available at: [Link].

Gabriel S, Martins F. First results of a long term morphodynamic process based model. Journal of Coastal Research. 2009; SI(56): 952-955. Available at: [Link].

Genio L, Sousa A, Vaz N, Dias J, Barroso C. Effect of low salinity on the survival of recently hatched veliger of Nassarius reticulatus (L.) in estuarine habitats: A case study of Ria de Aveiro. Journal of Sea Research. 2008; 59(3): 133-143. Available at: [Link].

Gobbetti LEC. Design of the filling and emptying system of the new Panama Canal locks. Journal of Applied Water Engineering and Research. 2013; 1(1): 28-38. Available at: [Link].

Gomez-gesteira M, Montero P, Prego R, Taboada JJ, Leitão P, Ruiz-Villarreal M, Neves R, Pérez-Villar V. A two-dimensional particle tracking model for pollution dispersion in A Coruña and Vigo Rias (NW Spain). Oceanologica Acta. 1999; 22: 167-177. Available at: [Link].

Henry L-A, Moreno Navas J, Roberts JM. Multi-scale interactions between local hydrography, seabed topography, and community assembly on cold-water coral reefs. Biogeosciences. 2013; 10:2737-2746. Available at: [Link].

Huhn F, von Kameke A, Allen-Perkins S, Montero P, Venancio A, Pérez-Muñuzuri V. Horizontal Lagrangian transport in a tidal-driven estuary—Transport barriers attached to prominent coastal boundaries. Continental Shelf Research. 2012; 39–40:1–13. Available at: [Link].

Huthnance JM, Coelho H, Griffiths CR, Knight PJ, Rees AP, Sinha B, Vangriesheim A, White M, Chatwin PG. Physical structures, advection and mixing in the region of Goban spur. Deep Sea Research Part II: Topical Studies in Oceanography. 2001; 48(14-15): 2979-3021. Available at: [Link].

Janeiro J, Fernandes E, Martins F, Fernandes R. Wind and freshwater influence over hydrocarbon dispersal on Patos Lagoon, Brazil. Marine Pollution Bulletin. 2008; 56(4): 650-665. Available at: [Link].

Janeiro J, Martins F, Relvas P. Towards the development of an operational tool for oil spills management in the Algarve coast. Journal of Coastal Conservation. 2012; 16(4): 449-460. Available at: [Link].

Janeiro J, Zacharioudaki A, Sarhadi E, Neves A, Martins F. Enhancing the management response to oil spills in the Tuscany Archipelago through operational modelling. Marine Pollution Bulletin, In Press. Available at: [Link].

K-O

Kenov IA, Garcia AC, Neves R. Residence time of water in the Mondego Estuary (Portugal). Estuarine, Coastal and Shelf Science. 2012; 106: 13–22. Available at: [Link].

Leitão P, Coelho H, Santos A, Neves R. Modelling the main features of the Algarve coastal circulation during July 2004: A downscaling approach. Journal of Atmospheric & Ocean Science. 2005; 10(4): 421-462. Available at: [Link].

Leitão P, Galvão P, Aires E, Almeida L, Viegas C. Fecal contamination modeling in coastal waters using a web service approach. Environmental Engineering and Management Journal. 2012; 11(5):899-906. Available at: [Link].

Loureiro S, Newton A, Icely J. Boundary conditions for the European Water Framework Directive in the Ria Formosa lagoon, Portugal (physico-chemical and phytoplankton quality elements). Estuarine, Coastal and Shelf Science. 2006; 67: 382-398. Available at: [Link].

Madeira D, Narciso L, Cabral HN, Vinagre C. Thermal tolerance and potential impacts of climate change on coastal and estuarine organisms, Journal of Sea Research. 2012; 70: 32-41. Available at: [Link].

Malhadas MS, Leitão PC, Silva A, Neves R. Effect of coastal waves on sea level in Óbidos Lagoon, Portugal. Continental Shelf Research. 2009; 29(9): 1240-1250. Available at: [Link].

Malhadas MS, Neves RJ, Leitão PC, Silva A. Influence of tide and waves on water renewal in Óbidos Lagoon, Portugal. Ocean Dynamics. 2010; 60(1): 41-55. Available at: [Link].

Malhadas MS, Silva A, Leitão PC, Neves R. Effect of the bathymetric changes on the hydrodynamic and residence time in Óbidos Lagoon (Portugal). Journal of Coastal Research. 2009; SI(56): 549-553. Available at: [Link].

Marín VH, Campuzano FJ. Un modelo hidrodinámico-barotrópico para los fiordos australes de Chile entre los 41° S y los 46° S. Ciencia y Tecnología del Mar. 2008; 31(2): 125-136. Available at: [Link]. (In Spanish).

Marín VH, Tironi A, Paredes MA, Contreras M. Modeling suspended solids in a Northern Chilean Patagonia glacier-fed fjord: GLOF scenarios under climate change conditions. Ecological Modelling. 2013; 264:7-16. Available at: [Link].

Martins F, Leitão P, Neves R. Simulating vertical water mixing in homogeneous estuaries: the SADO Estuary case. Hydrobiologia. 2002; 475/476: 221-227. Available at: [Link].

Martins F, Leitão P, Silva A, Neves R. 3D modelling in the Sado estuary using a new generic vertical discretization approach. Oceanologica Acta. 2001; 24(Supplement 1): 51-62. Available at: [Link].

Martins F, Pina P, Calado S, Delgado S, Neves R. A coupled hydrodynamic and ecological model to manage water quality in Ria Formosa coastal lagoon. Advances In Ecological Sciences. 2003; 18-19: 93-100. Available at: [Link].

Martins F, Reis MP, Neves R, Cravo AP, Brito A, Venâncio A. Molluscan Shellfish bacterial contamination in Ria Formosa coastal lagoon: A modelling approach. 2004; SI(39): 1551-1555. Available at: [Link].

Mateus M. A process-oriented model of pelagic biogeochemistry for marine systems. Part I: Model description. Journal of Marine Systems. 2012; 94(Supplement): S78–S89. Available at: [Link].

Mateus M, Leitão PC, de Pablo H, Neves R. Is it relevant to explicitly parameterize chlorophyll synthesis in marine ecological models?. Journal of Marine Systems. 2012; 94(Supplement): S23–S33. Available at: [Link].

Mateus M, Neves R. Evaluating light and nutrient limitation in the Tagus estuary using a process-oriented ecological model. Journal of Marine Engineering and Technology. 2008; 12A: 43-54. Available at: [Link]

Mateus M, Riflet G, Chambel P, Fernandes L, Fernandes R, Juliano M, Campuzano F, de Pablo H, Neves R. An operational model for the West Iberian coast: products and services. Ocean Science. 2012; 8: 713-732. Available at: [Link]

Mateus M, Vaz N, Neves R. A process-oriented model of pelagic biogeochemistry for marine systems. Part II: Application to a mesotidal estuary. Journal of Marine Systems. 2012; 94(Supplement): S90–S101. Available at: [Link].

Miranda R, Leitão PC, Coelho HS, Martins H, Neves RR. Transport and mixing simulation along the continental shelf edge using a Lagrangian approach. Bol. Inst. Esp. Oceanogr. 1999; 15(1-4): 39-60. Available at: [Link]

Morais P, Martins F, Chícharo MA, Lopes J, Chícharo L. Merging anchovy eggs abundance into a hydrodynamic model as an assessment tool for estuarine ecohydrological management. River Research and Applications. 2010. Available at: [Link]

Montero P, Gomez-gesteira M, Taboada JJ, Ruiz-Villarreal M, Santos AP, Neves RR, Pérez-Villar V. On residual circulation of the Ria of Vigo, using a 3-D baroclinic model. Bol. Inst. Esp. Oceanogr. 1999; 15(1-4): 31-38. Available at: [Link].

Navas JM, Telfer TC, Ross LG. Application of 3D hydrodynamic and particle tracking models for better environmental management of finfish culture. Continental Shelf Research. 2011; 31(6): 675-684. Available at: [Link].

Nobre A, Ferreira J, Newton A, Simas T, Icely J, Neves R. Management of coastal eutrophication: Integration of field data, ecosystem-scale simulations and screening models. Journal of Marine Systems. 2005; 56(3-4): 375-390. Available at: [Link].

Olsson O, Sorokin A, Ikramova M. Modelling scenarios to identify a combined sediment-water management strategy for the large reservoirs of the Tuyamuyun hydro-complex. Irrigation and Drainage Systems. 2011; 25(1):1-18. Available at: [Link].

P-T

Pando S, Juliano MF, García R, de Jesus Mendes PA, Thomsen L. Application of a lagrangian transport model to organo-mineral aggregates within the Nazaré canyon. Biogeosciences. 2013; 10: 4103-4115. Available at: [Link].

Pierini JO, Lovallo M, Telesca L, Gómez EA. Investigating prediction performance of an artificial neural network and a numerical model of the tidal signal at Puerto Belgrano, Bahia Blanca Estuary (Argentina). Acta Geophysica. 2013; 61(6): 1522-1537. Available at: [Link].

Portela LI, Neves R. Numerical modelling of suspended sediment transport in tidal estuaries: A comparison between the Tagus (Portugal) and the Scheldt (Belgium-the Netherlands). Netherlands Journal of Aquatic Ecology. 1994; 28(3-4): 329-335. Available at: [Link].

Ribeiro J, Silva A, Leitão P. High resolution tsunami modelling for the evaluation of potential risk areas in Setúbal (Portugal). Natural Hazards and Earth System Science. 2011; 11(8): 2371-2380. Available at: [Link].

Ruiz-Villarreal M, Montero P, Taboada JJ, Prego R, Leitão PC, Pérez-Villar V. Hydrodynamic model study of the Ria de Pontevedra under estuarine conditions. Estuarine, Coastal and Shelf Science. 2002; 54(1): 101-113. Available at: [Link].

Santoro P, Fernández M, Fossati M, Cazes, G, Terra, R Piedra-Cueva, I. Pre-operational forecasting of sea level height for the Río de la Plata. Applied Mathematical Modelling. 2011; 35(5): 2462-2478. Available at: [Link].

Santoro PE, Fossati M, Piedra-Cueva I. Study of the meteorological tide in the Río de la Plata. Continental Shelf Research. 2013; 60: 51-63. Available at: [Link].

Santos A, Martins H, Coelho H, Leitão PC, Neves R. A circulation model for the European ocean margin. Applied Mathematical Modelling. 2002; 26(5): 563-582. Available at: [Link].

Santos A, Nogueira J, Martins H. Survival of sardine larvae off the Atlantic Portuguese coast: a preliminary numerical study. ICES Journal of Marine Science. 2005; 62(4): 634-644. Available at: [Link].

Santos L, Vaz L, Gomes NCM, Vaz N, Dias JM, Cunha Â, Almeida A. Impact of freshwater inflow on bacterial abundance and activity in the estuarine system Ria de Aveiro. Estuarine, Coastal and Shelf Science. 2014; 138: 107–120. Available at: [Link].

Saraiva S, Pina P, Martins F, Santos M, Braunschweig F, Neves R. Modelling the influence of nutrient loads on Portuguese estuaries. Hydrobiologia. 2007; 587(1): 5-18. Available at: [Link].

Saruwatari A, Ingram DM, Cradden L. Wave–current interaction effects on marine energy converters. Ocean Engineering. 2013; 73: 106-118. Available at: [Link].

Sousa MC, Vaz N, Alvarez I, Gomez-Gesteira M, Dias JM. Modeling the Minho River plume intrusion into the Rias Baixas (NW Iberian Peninsula), Continental Shelf Research, In Press. Available at: [Link].

Taboada JJ, Prego R, Ruiz-villarreal M, Gomez-gesteira M, Montero P, Santos AP, Pérez-Villar V. Evaluation of the seasonal variations in the residual circulation in the Ría of Vigo (NW Spain) by means of a 3D baroclinic model. Estuarine, Coastal and Shelf Science. 1998; 47(5): 661-670. Available at: [Link].

Tironi A, Marin VH, Campuzano FJ. A management tool for assessing aquaculture environmental impacts in Chilean Patagonian Fjords: integrating hydrodynamic and pellets dispersion models. Environmental Management. 2010; 45(5): 953-962. Available at: [Link].

Toderascu R, Rusu E. Numerical simulations of the current field in the Black Sea basin. Analele Universitatii Maritime Constanta. 2013; 14(19): 177-184. Available at: [Link].

Trancoso AR, Braunschweig F, Chambel Leitão P, Obermann M, Neves R. An advanced modelling tool for simulating complex river systems. The Science of the total environment. 2009; 407(8): 3004-3016. Available at: [Link].

Trancoso AR, Saraiva S, Fernandes L, Pina P, Leitão P, Neves R. Modelling macroalgae using a 3D hydrodynamic-ecological model in a shallow, temperate estuary. Ecological Modelling. 2005; 187(2-3): 232-246. Available at: [Link].

Tzoraki O, Nikolaidis NP, Trancoso R, Braunschweig F, Neves R. A reach-scale biogeochemical model for temporary rivers. Hydrological Processes. 2009; 23(2): 272-283. Available at: [Link].

U-Z

Valle M, Chust G, Campo A, Wisz MS, Olsen SM, Garmendia JM, Borja A. Projecting future distribution of the seagrass Zostera noltii under global warming and sea level rise. Biological Conservation Biological Conservation. 2014; 170: 74–85. Available at: [Link].

Valentim JM, Vaz N, Silva H, Duarte B, Caçador I, Dias JM. Tagus Estuary and Ria de Aveiro salt marsh dynamics and the impact of sea level rise. Estuarine, Coastal and Shelf Science. 2013; 130:138-151. Available at: [Link].

Vaz N, Dias JM, Leitão P, Martins I. Horizontal patterns of water temperature and salinity in an estuarine tidal channel: Ria de Aveiro. Ocean Dynamics. 2005; 55(5-6): 416-429. Available at: [Link].

Vaz N, Dias JM, Leitão PC, Nolasco R. Application of the Mohid-2D model to a mesotidal temperate coastal lagoon. Computers & Geosciences. 2007; 33(9): 1204-1209. Available at: [Link].

Vaz N, Dias JM, Leitão PC. Three-dimensional modelling of a tidal channel: The Espinheiro Channel (Portugal). Continental Shelf Research. 2009; 29(1): 29-41. Available at: [Link].

Vaz N, Fernandes L, Leitão PC, Dias JM, Neves R. The Tagus estuarine plume induced by wind and river runoff: Winter 2007 case study. Journal of Coastal Research. 2009; IS(56): 1090-1094. Available at: [Link].

Vaz N, Leitão PC, Dias JM. Channel-ocean exchange driven by tides and river flow: Espinheiro Channel (Portugal). Water. 2007; SI(50): 1000-1004. Available at: [Link].

Vaz N, Mateus M, Dias JM. Semidiurnal and spring-neap variations in the Tagus Estuary: Application of a process-oriented hydro-biogeochemical model. Journal of Coastal Research. 2011; SI(64): 1619-1623. Available at: [Link]

Vaz N, Mateus M, Plecha S, Sousa MC, Leitão PC, Neves R, Dias JM. Modeling SST and chlorophyll patterns in a coupled estuary-coastal system of Portugal: The Tagus case study. Journal of Marine Systems, In Press. Available at: [Link].

Viegas C, Neves R, Fernandes R, Mateus M. Modelling tools to support an early alert system for bathing water quality. Environmental Engineering and Management Journal. 2012; 11(5): 907-918. Available at: [Link].

Viegas CN, Nunes S. Streams contribution on bathing water quality after rainfall events in Costa do Estoril - a tool to implement an alert system for bathing water quality. 2009; SI(56): 1691-1695. Available at: [Link].

Journal Papers By Year

2014

Campuzano FJ, Pierini JO, Leitão PC, Gómez EA, Neves RJ. Characterization of the Bahia Blanca estuary by data analysis and numerical modelling. Journal of Marine Systems. 2014; 129: 415-424. Available at: [Link].

Cho K-H, Li Y, Wang H, Park K-S, Choi J-Y, Shin K-I, Kwon J-I. Development and validation of an operational search and rescue modeling system for the Yellow Sea and the East and South China Seas. Journal of Atmospheric and Oceanic Technology. 2014; 31: 197–215. Available at: [Link].

Delpey MT, Ardhuin F, Otheguy P, Jouon A. Effects of waves on coastal water dispersion in a small estuarine bay. Journal of Geophysical Research: Oceans. 2014; 119: 1–17. Available at: [Link].

Janeiro J, Zacharioudaki A, Sarhadi E, Neves A, Martins F. Enhancing the management response to oil spills in the Tuscany Archipelago through operational modelling. Marine Pollution Bulletin, In Press. Available at: [Link].

Santos L, Vaz L, Gomes NCM, Vaz N, Dias JM, Cunha Â, Almeida A. Impact of freshwater inflow on bacterial abundance and activity in the estuarine system Ria de Aveiro. Estuarine, Coastal and Shelf Science. 2014; 138: 107–120. Available at: [Link].

Sousa MC, Vaz N, Alvarez I, Gomez-Gesteira M, Dias JM. Modeling the Minho River plume intrusion into the Rias Baixas (NW Iberian Peninsula), Continental Shelf Research, In Press. Available at: [Link].

Valle M, Chust G, Campo A, Wisz MS, Olsen SM, Garmendia JM, Borja A. Projecting future distribution of the seagrass Zostera noltii under global warming and sea level rise. Biological Conservation. 2014; 170: 74–85. Available at: [Link].

Vaz N, Mateus M, Plecha S, Sousa MC, Leitão PC, Neves R, Dias JM. Modeling SST and chlorophyll patterns in a coupled estuary-coastal system of Portugal: The Tagus case study. Journal of Marine Systems, In Press. Available at: [Link].

2013

Ballent A, Pando S, Purser A, Juliano MF, Thomsen L. Modelled transport of benthic marine microplastic pollution in the Nazaré Canyon. Biogeosciences. 2013; 10: 7957-7970. Available at: [Link].

Campuzano FJ, Mateus MD, Leitão PC, Leitão PC, Marín VH, Delgado LE, Tironi A, Pierini JO, Sampaio AFP, Almeida P, Neves RJ. Integrated coastal zone management in South America: A look at three contrasting systems. Ocean & Coastal Management. 2013; 72: 22-35. Available at: [Link].

Cho K-H, Choi J-Y, Jeong S-H, Choi J-W, Kwon J-I, Park K-S. Development of a skill assessment tool for the Korea operational oceanographic system. Acta Oceanologica Sinica. 2013; 32(9): 74-81. Available at: [Link].

Choi J-Y, Park J-Y, Cho K-H, Hyun S-K, Yoo J, Lee D-Y and Jun K-C. Field observation and modeling of wave set-up on a macrotidal beach: the Malipo Experiment. Journal of Coastal Research, Special Issue No. 65, 2013. Available at:[Link].

Deus R, Brito D, Kenov IA, Lima M, Costa V, Medeiros A, Neves R, Alves CN. Three-dimensional model for analysis of spatial and temporal patterns of phytoplankton in Tucuruí reservoir, Pará, Brazil. Ecological Modelling. 2013; 253: 28-43. Available at: [Link].

Fossati M, Piedra-Cueva I. A 3D hydrodynamic numerical model of the Río de la Plata and Montevideo’s coastal zone. Applied Mathematical Modelling. 2013; 37(3):1310-1332. Available at: [Link].

Gobbetti LEC. Design of the filling and emptying system of the new Panama Canal locks. Journal of Applied Water Engineering and Research. 2013; 1(1): 28-38. Available at: [Link].

Henry L-A, Moreno Navas J, Roberts JM. Multi-scale interactions between local hydrography, seabed topography, and community assembly on cold-water coral reefs. Biogeosciences. 2013; 10: 2737-2746. Available at: [Link].

Marín VH, Tironi A, Paredes MA, Contreras M. Modeling suspended solids in a Northern Chilean Patagonia glacier-fed fjord: GLOF scenarios under climate change conditions. Ecological Modelling. 2013; 130:138-151. Available at: [Link].

Pando S, Juliano MF, García R, de Jesus Mendes PA, Thomsen L. Application of a lagrangian transport model to organo-mineral aggregates within the Nazaré canyon. Biogeosciences. 2013; 10: 4103-4115. Available at: [Link].

Pierini JO, Lovallo M, Telesca L, Gómez EA. Investigating prediction performance of an artificial neural network and a numerical model of the tidal signal at Puerto Belgrano, Bahia Blanca Estuary (Argentina). Acta Geophysica. 2013; 61(6): 1522-1537. Available at: [Link].

Santoro PE, Fossati M, Piedra-Cueva I. Study of the meteorological tide in the Río de la Plata. Continental Shelf Research. 2013; 60: 51-63. Available at: [Link].

Saruwatari A, Ingram DM, Cradden L. Wave–current interaction effects on marine energy converters. Ocean Engineering. 2013; 73: 106-118. Available at: [Link].

Toderascu R, Rusu E. Numerical simulations of the current field in the Black Sea basin. Analele Universitatii Maritime Constanta. 2013; 14(19): 177-184. Available at: [Link].

Valentim JM, Vaz N, Silva H, Duarte B, Caçador I, Dias JM. Tagus Estuary and Ria de Aveiro salt marsh dynamics and the impact of sea level rise. Estuarine, Coastal and Shelf Science. 2013; 130:138-151. Available at: [Link].

2012

Arifin T, Y Y, Ismail MFA. Kondisi arus pasang surut di perairan pesisir kota Makassar, Sulawesi Selatan. Tidal currents condition in Makassar waters, South Sulawesi. Depik. 2012; 1(3): 183-188. Available at: [Link] (In Indonesian).

Huhn F, von Kameke A, Allen-Perkins S, Montero P, Venancio A, Pérez-Muñuzuri V. Horizontal Lagrangian transport in a tidal-driven estuary—Transport barriers attached to prominent coastal boundaries. Continental Shelf Research. 2012; 39–40:1–13. Available at: [Link].

Janeiro J, Martins F, Relvas P. Towards the development of an operational tool for oil spills management in the Algarve coast. Journal of Coastal Conservation. 2012; 16(4): 449-460. Available at: [Link].

Kenov IA, Garcia AC, Neves R. Residence time of water in the Mondego Estuary (Portugal). Estuarine, Coastal and Shelf Science. 2012; 106: 13–22. Available at: [Link].

Leitão P, Galvão P, Aires E, Almeida L, Viegas C. Fecal contamination modeling in coastal waters using a web service approach. Environmental Engineering and Management. 2012; 11(5): 899-906. Available at: [Link].

Madeira D, Narciso L, Cabral HN, Vinagre C. Thermal tolerance and potential impacts of climate change on coastal and estuarine organisms, Journal of Sea Research. 2012; 70: 32-41. Available at: [Link].

Mateus M. A process-oriented model of pelagic biogeochemistry for marine systems. Part I: Model description. Journal of Marine Systems. 2012; 94(Supplement): S78–S89. Available at: [Link].

Mateus M, Leitão PC, de Pablo H, Neves R. Is it relevant to explicitly parameterize chlorophyll synthesis in marine ecological models?. Journal of Marine Systems. 2012; 94(Supplement): S23–S33. Available at: [Link].

Mateus M, Riflet G, Chambel P, Fernandes L, Fernandes R, Juliano M, Campuzano F, de Pablo H, Neves R. An operational model for the West Iberian coast: products and services. Ocean Science. 2012; 8: 713-732. Available at: [Link]

Mateus M, Vaz N, Neves R. A process-oriented model of pelagic biogeochemistry for marine systems. Part II: Application to a mesotidal estuary. Journal of Marine Systems. 2012; 94(Supplement): S90–S101. Available at: [Link].

Viegas C, Neves R, Fernandes R, Mateus M. Modelling tools to support an early alert system for bathing water quality. Environmental Engineering and Management Journal. 2012; 11(5): 907-918. Available at: [Link].

2011

Navas JM, Telfer TC, Ross LG. Application of 3D hydrodynamic and particle tracking models for better environmental management of finfish culture. Continental Shelf Research. 2011; 31(6): 675-684. Available at: [Link].

Olsson O, Sorokin A, Ikramova M. Modelling scenarios to identify a combined sediment-water management strategy for the large reservoirs of the Tuyamuyun hydro-complex. Irrigation and Drainage Systems. 2011; 25(1):1-18. Available at: [Link].

Ribeiro J, Silva A, Leitão P. High resolution tsunami modelling for the evaluation of potential risk areas in Setúbal (Portugal). Natural Hazards and Earth System Science. 2011; 11(8): 2371-2380. Available at: [Link].

Santoro P, Fernández M, Fossati M, Cazes, G, Terra, R Piedra-Cueva, I. Pre-operational forecasting of sea level height for the Río de la Plata. Applied Mathematical Modelling. 2011; 35(5): 2462-2478. Available at: [Link].

Vaz N, Mateus M, Dias JM. Semidiurnal and spring-neap variations in the Tagus Estuary: Application of a process-oriented hydro-biogeochemical model. Journal of Coastal Research. 2011; SI(64): 1619-1623. Available at: [Link].

2010

Campuzano F, Nunes S, Malhadas M, Neves R. Modelling hydrodynamics and water quality of Madeira Island (Portugal). GLOBEC International Newsletter. 2010; 16(1): 40-42. [Download].

Malhadas MS, Neves RJ, Leitão PC, Silva A. Influence of tide and waves on water renewal in Óbidos Lagoon, Portugal. Ocean Dynamics. 2010; 60(1): 41-55. Available at: [Link].

Morais P, Martins F, Chícharo MA, Lopes J, Chícharo L. Merging anchovy eggs abundance into a hydrodynamic model as an assessment tool for estuarine ecohydrological management. River Research and Applications. 2010. Available at: [Link]

Tironi A, Marin VH, Campuzano FJ. A management tool for assessing aquaculture environmental impacts in Chilean Patagonian Fjords: integrating hydrodynamic and pellets dispersion models. Environmental Management. 2010; 45(5): 953-62. Available at: [Link].

2009

Canas A, Santos A, Leitão P. Effect of large scale atmospheric pressure changes on water level in the Tagus Estuary. Journal of Coastal Research. 2009; SI(56): 1627-1631. Available at: [Link].

Gabriel S, Martins F. First results of a long term morphodynamic process based model. Journal of Coastal Research. 2009; SI(56): 952-955. Available at: [Link].

Malhadas MS, Leitão PC, Silva A, Neves R. Effect of coastal waves on sea level in Óbidos Lagoon, Portugal. Continental Shelf Research. 2009; 29(9): 1240-1250. Available at: [Link].

Malhadas MS, Silva A, Leitão PC, Neves R. Effect of the bathymetric changes on the hydrodynamic and residence time in Óbidos Lagoon (Portugal). Journal of Coastal Research. 2009; SI(56): 549-553. Available at: [Link].

Trancoso AR, Braunschweig F, Chambel Leitão P, Obermann M, Neves R. An advanced modelling tool for simulating complex river systems. The Science of the total environment. 2009; 407(8): 3004-3016. Available at: [Link].

Tzoraki O, Nikolaidis NP, Trancoso R, Braunschweig F, Neves R. A reach-scale biogeochemical model for temporary rivers. Hydrological Processes. 2009; 23(2): 272-283. Available at: [Link].

Vaz N, Dias JM, Leitão PC. Three-dimensional modelling of a tidal channel: The Espinheiro Channel (Portugal). Continental Shelf Research. 2009; 29(1): 29-41. Available at: [Link].

Vaz N, Fernandes L, Leitão PC, Dias JM, Neves R. The Tagus estuarine plume induced by wind and river runoff: Winter 2007 case study. Journal of Coastal Research. 2009; IS(56): 1090-1094. Available at: [Link].

Viegas CN, Nunes S. Streams contribution on bathing water quality after rainfall events in Costa do Estoril - a tool to implement an alert system for bathing water quality. 2009; SI(56): 1691-1695. Available at: [Link].

2008

Genio L, Sousa A, Vaz N, Dias J, Barroso C. Effect of low salinity on the survival of recently hatched veliger of Nassarius reticulatus (L.) in estuarine habitats: A case study of Ria de Aveiro. Journal of Sea Research. 2008; 59(3): 133-143. Available at: [Link].

Janeiro J, Fernandes E, Martins F, Fernandes R. Wind and freshwater influence over hydrocarbon dispersal on Patos Lagoon, Brazil. Marine Pollution Bulletin. 2008; 56(4): 650-665. Available at: [Link].

Marín VH, Campuzano FJ. Un modelo hidrodinámico-barotrópico para los fiordos australes de Chile entre los 41° S y los 46° S. Ciencia y Tecnología del Mar. 2008; 31(2): 125-136. Available at: [Link]. (In Spanish).

Mateus M, Neves R. Evaluating light and nutrient limitation in the Tagus estuary using a process-oriented ecological model. Journal of Marine Engineering and Technology. 2008; 12A: 43-54. Available at: [Link]

2007

Saraiva S, Pina P, Martins F, Santos M, Braunschweig F, Neves R. Modelling the influence of nutrient loads on Portuguese estuaries. Hydrobiologia. 2007; 587(1): 5-18. Available at: [Link].

Vaz N, Dias JM, Leitão PC, Nolasco R. Application of the Mohid-2D model to a mesotidal temperate coastal lagoon. Computers & Geosciences. 2007; 33(9): 1204-1209. Available at: [Link].

Vaz N, Leitão PC, Dias JM. Channel-ocean exchange driven by tides and river flow: Espinheiro Channel (Portugal). Water. 2007; SI(50): 1000-1004. Available at: [Link].

2006

Carracedo P, Torres-López S, Barreiro M, Montero P, Balseiro CF, Penabad E, Leitao PC, Pérez-Muñuzuri V. Improvement of pollutant drift forecast system applied to the Prestige oil spills in Galicia Coast (NW of Spain): development of an operational system. Marine Pollution Bulletin. 2006; 53(5-7): 350-360. Available at: [Link].

Loureiro S, Newton A, Icely J. Boundary conditions for the European Water Framework Directive in the Ria Formosa lagoon, Portugal (physico-chemical and phytoplankton quality elements). Estuarine, Coastal and Shelf Science. 2006; 67: 382-398. Available at: [Link].

2005

Leitão P, Coelho H, Santos A, Neves R. Modelling the main features of the Algarve coastal circulation during July 2004: A downscaling approach. Journal of Atmospheric & Ocean Science. 2005; 10(4): 421-462. Available at: [Link].

Nobre A, Ferreira J, Newton A, Simas T, Icely J, Neves R. Management of coastal eutrophication: Integration of field data, ecosystem-scale simulations and screening models. Journal of Marine Systems. 2005; 56(3-4): 375-390. Available at: [Link].

Santos A, Nogueira J, Martins H. Survival of sardine larvae off the Atlantic Portuguese coast: a preliminary numerical study. ICES Journal of Marine Science. 2005; 62(4): 634-644. Available at: [Link].

Trancoso AR, Saraiva S, Fernandes L, Pina P, Leitão P, Neves R. Modelling macroalgae using a 3D hydrodynamic-ecological model in a shallow, temperate estuary. Ecological Modelling. 2005; 187(2-3): 232-246. Available at: [Link].

Vaz N, Dias JM, Leitão P, Martins I. Horizontal patterns of water temperature and salinity in an estuarine tidal channel: Ria de Aveiro. Ocean Dynamics. 2005; 55(5-6): 416-429. Available at: [Link].

Conference Proceedings

Bartolomeu S, Malhadas M, Leitão P, Dias J. Influence of MeteOcean processes on MSYM sea level predictions in the Singapore and Malacca Straits. 3.as Jornadas de Engenharia Hidrográfica, 24-26 June 2014, Lisbon, Portugal. Extended abstracts: 155-158. [Download].

Basos N, Martins F, Rodrigues J. Bathymetry interpolation for hydrodynamic modelling. 3.as Jornadas de Engenharia Hidrográfica, 24-26 June 2014, Lisbon, Portugal. Extended abstracts: 327-330. [Download].

Braunschweig F, Leitao PC, Fernandes L, Pina P, Neves RJJ. The object oriented design of the integrated Water Modelling System. Developments in Water Science. 2004; 55: 1079-1090. Available at: [Link].

Canas Â, dos Santos A, Leitão P. Implementation and validation of a SFEK data assimilation application for an hydrodynamic model of the Tagus Estuary. XI International Symposium on Oceanography of the Bay of Biscay. 2-4 April 2008, San Sebastian, Spain. Revista de Investigacion Marina, 3, 159-160. [Download].

Campuzano FJ, Fernandes R, Leitão PC, Viegas C, de Pablo H, Neves R. Implementing local operational models based on an offline downscaling technique: The Tagus estuary case. 2.as Jornadas de Engenharia Hidrográfica, 20-22 June 2012, Lisbon, Portugal. Extended abstracts: 105-108. [Download].

Campuzano FJ, Juliano M, Fernandes R, Pinto L, Neves R. Downscalling from the deep ocean to the estuarine intertidal areas: an operational framework for the Portuguese exclusive economic zone. 6th SCACR – International Short Course/Conference on Applied Coastal Research, 4-7 June 2013, Lisbon, Portugal. [Download].

Campuzano FJ, Kenov I, Brito D, Juliano M, Fernandes R, Pinto L, Neves R. Numerical evaluation of the river nutrients influence for the Western Iberian coastal region. 3.as Jornadas de Engenharia Hidrográfica, 24-26 June 2014, Lisbon, Portugal. Extended abstracts: 263-266. [Download].

Campuzano F, Nunes S, Malhadas MS, Nunes D, Jardim M, Neves R. Modelação da hidrodinâmica da Ilha da Madeira. 6ªs Jornadas Portuguesas de Engenharia Costeira e Portuária, JPECP, 8-9 October 2009, Funchal, Madeira, Portugal. (Portuguese) [Download].

Campuzano F, Nunes S, Malhadas MS, Nunes D, de Pablo H, Neves R. Efeito das descargas de águas residuais e emissários submarinos na produção primaria da costa sul da Ilha da Madeira. 10º Congresso da Água, 21-24 March 2010, Alvor, Algarve, Portugal. (Portuguese) [Download].

Choi J-Y, Park J-Y, Cho K-H, Hyun S-K, Yoo J, Lee D-Y, Jun K-C. Field observation and modeling of wave set-up on a macrotidal beach: the MALIPO Experiment. Journal of Coastal Research. 2013; SI 65: 183-188. ICS 2013 - 12th International Coastal Symposium Proceedings, 8-12 April 2013 Plymouth, UK. Available at: [Link].

Fernandes R, Neves R, Viegas C, Leitão P. Integration of an oil and inert spill model in a framework for risk management of spills at sea - A case study for the Atlantic area. 36th AMOP Technical Seminar on Environmental Contamination and Response, 4-6 June 2013, Halifax, Nova Scotia, Canada. pp. 326-353. [Download].

Franz G, Fernandes R, de Pablo H, Viegas C, Pinto L, Campuzano F, Ascione I, Leitão P, Neves R. Tagus Estuary hydro-biogeochemical model: Inter-annual validation and operational model update. 3.as Jornadas de Engenharia Hidrográfica, 24-26 June 2014, Lisbon, Portugal. Extended abstracts: 103-106. [Download].

Leitão P, Moreno L, Pérez C, Espejo J, Malhadas M, Ribeiro J, Nogueira J, Neves R, Fernández M. Analysis of superficial anomalies observed in Iberia Southwest coast - Numerical model approach. International Conference on Computational Methods in Marine Engineering MARINE 2011. 28-30 September 2011, Lisbon, Portugal. [Download].

Lim H, Kim C, Park K, Shim J. Operational Oceanographic System for the Southern Coastal Waters of Korea. Conference on Coastal Engineering Practice 2011: 351-358. Conference on Coastal Engineering Practice Proceedings, 21-24 August 2011, San Diego, California, United States. Available at: [Link].

Malhadas M S, Leitão P C, Ribeiro J, Silva A, Leitão P, Cota T. Sistema integrado de simulação de cheias no Estuário do Espírito Santo (Baía de Maputo, Moçambique). 2.as Jornadas de Engenharia Hidrográfica, 20-22 June 2012, Lisbon, Portugal. Extended abstracts: 135-138. (Portuguese) [Download].

Mendes R, Vaz N, Dias JM. Numerical modeling changes induced by the low lying areas adjacent to Ria de Aveiro. Journal of Coastal Research. 2011; SI 64: 1125-1129. ICS 2011 - 11th International Coastal Symposium Proceedings, 9-14 May 2011, Szczecin, Poland. Available at: [Link].

Mendes R, Vaz N, Dias JM. Potential impacts of the mean sea level rise on the hydrodynamics of the Douro river estuary. Journal of Coastal Research. 2013; SI 65: 1951-1956. ICS 2013 - 12th International Coastal Symposium Proceedings, 8-12 April 2013 Plymouth, UK. Available at: [Link].

Nunes S, Alves MH, Soares C, Nunes M, Caramujo MJ, Pereira L. Perfis de águas balneares no contexto da directiva 2006/7/CE sobre gestão da qualidade das águas balneares. VI Congresso Planeamento e Gestão das Zonas Costeiras dos Países de Expressão Portuguesa, 4-8 April 2011, Ilha da Boavista, Cabo Verde. (Portuguese) [Download].

Picado A, Lopes CL, Mendes R, Vaz N, Dias JM. Storm surge impact in the hydrodynamics of a tidal lagoon: the case of Ria de Aveiro. Journal of Coastal Research. 2013; SI 65: 796-801. ICS 2013 - 12th International Coastal Symposium Proceedings, 8-12 April 2013 Plymouth, UK. Available at: [Link].

Pinto L, Campuzano FJ, Fernandes R, Fernandes L,Neves R. An operational model for the Portuguese coast. 2.as Jornadas de Engenharia Hidrográfica, 20-22 June 2012, Lisbon, Portugal. Extended abstracts: 85-88. [Download].

Pinto L, Campuzano FJ, Juliano M, Fernandes R, Neves R. Implementation and validation of an operational model for the Portuguese exclusive economic zone. 3.as Jornadas de Engenharia Hidrográfica, 24-26 June 2014, Lisbon, Portugal. Extended abstracts: 107-110. [Download].

Riflet G, Reffray G, Fernandes R, Chambel P, Nogueira J, Neves R. Downscaling a large-scale ocean-basin model: An intercomparison exercise in the Bay of Biscay. V European Conference on Computational Fluid Dynamics, ECCOMAS CFD 2010, 14-17 June 2010, Lisbon, Portugal. [Download].

Ruiz-Villarreal M, Coelho H, Díaz G, Nogueira J. Slope current in the Cantabrian: Observations and modeling of seasonal variability and interaction with Aviles Canyon. ICES CM 2004/N:12. In: ICES CM.Vol 12. Nice (France) 2004. Available at: [Link].

Silva A, Leitão PC, Carvalho S, Alves P. Abordagens integradas de monitorização da descarga de efluentes urbanos em águas costeiras: o exemplo de S. Martinho do Porto. 9º Congresso da Água. 2-4 April 2008, Estoril, Portugal. [Link].

Sousa MC, Vaz N, Alvarez I, Dias JM. Effect of Minho estuarine plume on Rias Baixas: numerical modeling approach. Journal of Coastal Research. 2013; SI 65: 2059-2064. ICS 2013 - 12th International Coastal Symposium Proceedings, 8-12 April 2013 Plymouth, UK. Available at: [Link].

Viegas C N, Fernandes R, Jauch E, Aires E, Chambel P, Lopes C, Neves R. Sistema de alerta e previsão para a qualidade das águas balneares - Perfis da água balnear de Carcavelos, Torre e Santo Amaro de Oeiras. 11º Congresso da Água, 6-8 February 2012, Porto, Portugal. (Portuguese) [Download].

Books

Ocean modelling for coastal management - Case studies with MOHID. Eds. M. Mateus & R. Neves (2013) IST Press; 265 p. [Download Complete Book]

Perspectives on Integrated Coastal Zone Management in South America. Eds. R. Neves, J. Baretta & M. Mateus (2008), IST Press; 620 p. [Download Complete Book]

Book Chapters

Campuzano, F.J., Leitão P.C., Gonçalves, M.I., Marín, V.H. and Tironi, A. (2008). Hydrodynamical vertical 2D model for the Aysén Fjord, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 555-566. [Download Complete Book]

Campuzano, F.J., Marín, V.H., Tironi, A. and Leitão P.C. (2008). Ecological conceptual model for a southern Chilean fjord: The Aysén Fjord case study, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 567-579. [Download Complete Book]

Campuzano, F.J., Pierini, J.O. and Leitão, P.C. (2008). Hydrodynamics and sediments in Bahía Blanca estuary: Data analysis and modelling, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 483-503. [Download Complete Book]

De Pablo H, Brito D, Mateus M, Trancoso AR, Campuzano FJ, Pinto L, Neves R (2013). An integration methodology to estimate water fluxes and constituents budgets in coastal areas: application to the Tagus coastal area. In: Ocean modelling for coastal management. Case studies with MOHID, M. Mateus & R. Neves (eds.), IST Press. pp 213-224. [Download Chapter]

Leitão, P.C., Mateus, M., Braunschweig, F., Fernandes L. and Neves, R. (2008). Modelling coastal systems: the MOHID Water numerical lab, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 77-88. [Download Complete Book]

Mateus, M. and Campuzano, F.J. (2008). The DPSIR framework applied to the Integrated Management of Coastal Areas, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 29-42. [Download Complete Book]

Mateus, M. and Fernandes, R. (2008). Modelling Pollution: Oil Spills and Faecal Contamination, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 89-96. [Download Complete Book]

Mateus, M., Sampaio, A. and Mateus, S. (2008). An ecological Model application to the Santos Estuary, Brazil: testing and validation, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 401-424. [Download Complete Book]

Marín, V.H., Tironi, A., Paredes, M.A. and Campuzano, F. (2008). The estuarine system of the Aysén Fjord, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 333-339. [Download Complete Book]

Neves, R.(2013). The Mohid concept. Case studies with MOHID, M. Mateus & R. Neves (eds.), IST Press. pp 1-11. [Download Chapter]

Neves, R., Coelho, H., Taborda, R. and Pina, P. (2002). Physical processes and modelling at ocean margins, In: Ocean Margin Systems, Wefer, G., Billett, D., Hebbeln, D., Jørgensen, B.B., Schlüter, M., van Weering, T. (eds.) Springer-Verlag Berlin Heidelberg pp 99-124. Available at: [Google Books] [Download Chapter]

Neves, R. (2007). Numerical models as decision support tools in coastal areas, In: Assessment of the Fate and Effects of Toxic Agents on Water Resources, I.E. Gonenc, V.G. Koutitonsky, B. Rashleigh, R.B. Ambrose Jr., J.P. Wolfin (eds) Nato Security through Science Series - C: Environmental Security, Springer pp 171-195. Available at: [Download Chapter]

Nogueira J, Campuzano FJ, Neves R (2013). Sardine larvae vertical migration and horizontal dispersion patterns related to light intensity in the dynamic western Portuguese coast: a numerical study. In: Ocean modelling for coastal management. Case studies with MOHID, M. Mateus & R. Neves (eds.), IST Press. pp 161-173. [Download Chapter]

Perán AI, Campuzano FJ, Senabre T, Mateus M, Gutiérrez JM, Belmonte A, Aliaga V, Neves R (2013). Modelling the environmental and productive carrying capacity of a great scale aquaculture park in the Mediterranean coast and its implications. In: Ocean modelling for coastal management. Case studies with MOHID, M. Mateus & R. Neves (eds.), IST Press. pp 249-265. [Download Chapter]

Pierini, J.O., Campuzano, F., Marcovecchio, J. and Perillo, G.M.E. (2008). The application of MOHID to assess the potential effect of sewage discharge system at Bahía Blanca estuary (Argentina), In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 515-522. [Download Complete Book]

Pierini, J.O., Marcovecchio, J., Campuzano, F. and Perillo, G.M.E. (2008). Evolution of salinity and temperature in Bahía Blanca estuary, Argentina, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 505-513. [Download Complete Book]

Pierini, J.O., Marcovecchio, J., Campuzano, F. and Perillo, G.M.E. (2008). MOHID oil spill in coastal zones: A case study in Bahía Blanca estuary (Argentina), In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 523-528. [Download Complete Book]

Portela L., Cancino, L. and Neves, R. (1992). Modelling of Tidal Flow and Transport Processes: A Case Study in the Tejo Estuary, In: Computer Modelling of Seas and Coastal Regions, P. W. Partridge (ed.), Springer Netherlands. pp 449-461. [Link]

Sampaio, A.F., Mateus, M., Ribeiro, R.B. and Berzin, G. (2008). A modelling approach to the study of faecal pollution in the Santos Estuary, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 425-434. [Download Complete Book]

Sampaio, A.F., Mateus, M. and Ribeiro, R.B. (2008). Assessing the impact of several development scenarios on the water quality in Santos Estuary, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 435-444.[Download Complete Book]

Ruiz-Villareal, M., Bolding, K., Burchard, H. and Demirov, E. (2005). Coupling of the GOTM turbulence module to some three-dimensional ocean models, In: Marine Turbulence: Theories, Observations, and Models. Results of the CARTUM Project, H.Z. Baumert, J.H. Simpson & J. Sundermann (eds.), Cambridge University Press. pp 225-237. Available at: [Google Books][Download Chapter]

Tironi, A., Marin, V.H. and Campuzano, F. (2008). A management tool for salmon aquaculture: Integrating MOHID and GIS applications for local waste management, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 585-595. [Download Complete Book]

Thesis

PhD Thesis

Canas A (2009). Modelling and data assimilation techniques for operational hydrodynamic forecast in Tagus Estuary. PhD thesis. Technical University of Lisbon, Portugal. [Download]

Coelho H (2002). Modelação de processos físicos relacionados com a circulação oceânica na margem continental Ibérica. PhD thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Delpey M (2012). Etude de la dispersion horizontale en zone littorale sous l'effet de la circulation tridimensionnelle forcée par les vagues. PhD thesis. ’Université européenne de Bretagne, France. [Download]

Garcia A C (2008). Fine sediments resuspension processes and transport in Nazaré submarine canyon. PhD thesis. Technical University of Lisbon, Portugal. [Download]

Leitão P C (2003). Integração de escalas e de processos na modelação no ambiente marinho. PhD thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Martins F A (2000). Modelação matemática tridimensional de escoamentos costeiros e estuarinos usando uma abordagem de coordenada vertical genérica. PhD thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Mateus M (2006). A process-oriented biogeochemical model for marine ecosystems: Development, numerical study and application. PhD thesis. Technical University of Lisbon, Portugal. [Download]

Montero P (1999). Estudio de la hidrodinámica de la Ría de vigo mediante un modelo de volúmenes finitos. PhD thesis. Universidad de Santiago de Compostela, Spain. (Spanish) [Download]

Obermann M (2007). Nutrient dynamics in temporary waters of Mediterranean catchments. PhD thesis. University of Hannover. [Download]

Riflet G (2010). Downscaling large-scale ocean basin solutions in regional three-dimensional hydrodynamic models. PhD thesis. Technical University of Lisbon. [Download]

Ruiz-Villareal M (2000). Parameterization of turbulence in the ocean and application of a 3D model to the ria de Pontevedra. PhD thesis. Universidad de Santiago de Compostela. [Download]

Silva A (1991). Modelação matemática não linear de ondas de superfície e de correntes litorais. PhD thesis. Technical University of Lisbon. (Portuguese) [Download]

MSc Thesis

Antunes I (2000). Modelação matemática da qualidade da água no estuário do Tejo. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Barão L (2007). Carbon, nitrogen and phosphorus soil cycle modeling. MSc dissertation thesis. Technical University of Lisbon, Portugal. [Download]

Bernardes B (2007). Hydrodynamical and ecological modelling of the North Sea. MSc dissertation thesis. Technical University of Lisbon, Portugal. [Download]

Braunschweig F (2001). Generalização de um modelo de circulação costeira para albufeiras. MSc dissertation thesis. Technical University of Lisbon, Portugal. [Download]

Coelho H (1996).Modelação numérica da turbulência oceânica. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

de Clippele J (1998). Cohesive sediment transport in the Tagus Estuary. MSc dissertation thesis. Diplôme d’Etudes Approfondies Européen en Modélisation de l’Environnement Marin. [Download]

Duarte S (2001). Bactérias marinhas, sua importância e efeitos no ciclo dos nutrientes - Modelo ecológico. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Fernandes L (2005). Modelling of arsenic dynamics in the Tagus Estuary. MSc dissertation thesis. Technical University of Lisbon, Portugal. [Download]

Fernandes R (2005). Modelação operacional no estuário do Tejo. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Fontes C L (2000). Modelação matemática de processos diagenéticos. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Godoy, F B (2009). Modelagem hidrológico-hidrodinámica da Lagoa da conceição - SC. MSc dissertation thesis. Université de Liège. Universidade Federal de Santa Catarina, Brazil. (Portuguese) [Download]

Laran S (2000). A theoretical model of pelagic ecosystem and nitrogen waste in a aquaculturing pound. Application to the rearing of sparus aurata L. and dicentrarchus labrax L. in the Sado Estuary (Portugal). MSc dissertation thesis. Université de Liège, Belgium. [Download]

Leitão P C (1996). Modelo de dispersão lagrangeano tridimensional. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Malhadas M (2008). Modelação do impacte de emissários submarinos em zonas costeiras - caso da Foz do Arelho. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Mateus M (1999). Modelação do ciclo biogeoquímico do azoto na zona do Cabo de S. Vicente. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Miranda R (1997). Nitrogen biogeochemical cycle modeling in the North Atlantic Ocean. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Monteiro R (2001). Fish Growth Modelling - Growth of European anchovy (Engraulis encrasicolus) in the Tagus Estuary, Portugal. MSc dissertation thesis. Diplome D'Etudes Approfondies Europeen en Modelisation de L'Environment Marin. [Download]

Nogueira J (2005). Estudo numérico do recrutamento de pequenos peixes pelágicos na Costa Ibérica. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Parreira C N (2012). Avaliação da hidrodinâmica e da poluição no Canal de Piaçaguera, no Estuário de Santos-São Vicente (SP), a partir de informações ambientais e modelagem numérica. MSc dissertation thesis. Universidade de São Paulo, Brazil. (Portuguese) [Download]

Pina P (2001). An integrated approach to study the Tagus estuary water quality. MSc dissertation thesis. Technical University of Lisbon, Portugal. [Download]

Ramos P (2002). Modelação matemática da qualidade da água no estuário do Tejo. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Rodrigues V (1997). Modelação do transporte e dispersão de constituintes em zonas costeiras. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Sampaio A (2010). Avaliação da correlação entre parâmetros de qualidade da água e socioeconômicos no complexo estuarino de Santos – São Vicente, através de modelagem numérica ambiental. MSc dissertation thesis. Universidade de São Paulo, Brazil. (Portuguese) [Download]

Saraiva S (2005). Modelação ecológica da Ria de Aveiro: o papel das macroalgas. MSc dissertation thesis. Technical University of Lisbon, Portugal. (Portuguese) [Download]

Theias H (2005) Numerical modeling of non-hydrostatic processes in estuarine and coastal regions. MSc dissertation thesis. Technical University of Lisbon, Portugal. [Download]

Final Course Dissertations

Brito D (2005). Integração de detecção remota, dados in-situ e modelos numéricos no estudo do transporte de sedimentos coesivos no estuário do Tejo. Final Course Dissertation. Technical University of Lisbon. (Portuguese) [Download]

Carmo M (2005). Modelação do transporte de sedimentos em ambientes costeiros. Final Course Dissertation. Technical University of Lisbon. (Portuguese) [Download]

Galvão P (2002). Solute Dynamics in Unsaturated Soil. Final Course Dissertation. Technical University of Lisbon. [Download]

Salgueiro PB (2002). Modelação matemática de dragagem do canal da barra e da baia de rotação do terminal de contentores do estuário do Sado. Final Course Dissertation. Technical University of Lisbon. (Portuguese) [Download]

Trancoso AR (2002). Modelling macroalgae in estuaries. Final Course Dissertation. Technical University of Lisbon. [Download]

Fernandes L (2001). Transporte de poluentes em estuários. Final Course Dissertation. Technical University of Lisbon. (Portuguese) [Download]

Fernandes R (2001). Modelação de derrames de hidrocarbonetos. Final Course Dissertation. Technical University of Lisbon. (Portuguese) [Download]

Saraiva AS (2001). Produção primária de biomassa no estuário do Tejo: estudo da variabilidade das descargas. Final Course Dissertation. Technical University of Lisbon. (Portuguese) [Download]

Cunha MM (1998). Impacte resultante da variação do regime de caudais sobre o estuário do Guadiana. Final Course Dissertation. Technical University of Lisbon. (Portuguese) [Download]

Pina P (1998). O impacte das dragagens no transporte de sedimentos coesivos no estuário do Tejo. Technical University of Lisbon. (Portuguese) [Download]

Reports

Campuzano-Guillén FJ, Allen, JH, Scott T. (2004). The numerical modelling of ecosystem response to nutrients: Application to the Scheldt estuary and plume. IECS (Institute of Estuarine and Coastal Studies) report, University of Hull, for the European Commission, contract nº EVK3-CT-2000-00040 “EUROTROPH” (report 2 of 4). [Download]

Manuals

User Manual of MOHID Graphical User Interfaces - User Manual for MOHID GUI, GIS, Postprocessor & Time Series Editor

• [Download English Version (2005)]
• [Download Portuguese Version (2011)]

MOHID Fish larvae manual (2012) [Download]

Light parameterization in MOHID (2011) [Download]

Coupling Water-Atmosphere User Manual

MOHID WaterQuality Module Manual (2006) [Download]

Technical Manual of the MOHIDJET (2003) [Download]

Mohid Description: Description of the 3D water modeling system Mohid (2003) [Download]

Water Quality Model: Equations & Keywords (2002) [Download]

Add your Publication

If you have a publication related to the Mohid Modelling System and you want to include it in this list, please let us know by sending an email with the reference and the link where it can be found. Thank you very much for your collaboration.