Difference between revisions of "Mohid Bibliography"

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Journal Papers

Beckers PM, Neves RJ. A semi-implicit tidal model of the North European Continental Shelf.Applied Mathematical Modelling. 1985; 9(6):395-402. Available at: http://dx.doi.org/10.1016/0307-904X(85)90104-0.

Braunschweig F, Martins F, Chambel P, Neves R. A methodology to estimate renewal time scales in estuaries: the Tagus Estuary case. Ocean Dynamics. 2003;53(3):137-145. Available at: http://www.springerlink.com/openurl.asp?genre=article&id=doi:10.1007/s10236-003-0040-0.

Cancino L, Neves R. Hydrodynamic and sediment suspension modelling in estuarine systems Part I: Description of the numerical models. Journal of Marine Systems. 1999;22(2-3):105-116. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0924796399000354.

Cancino L, Neves R. Hydrodynamic and sediment suspension modelling in estuarine systems Part II: Application to the Western Scheldt and Gironde estuaries. Journal of Marine Systems. 1999;22(2-3):117-131. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0924796399000366.

Carracedo P, Torres-López S, Barreiro M, et al. Improvement of pollutant drift forecast system applied to the Prestige oil spills in Galicia Coast (NW of Spain): development of an operational system. Marine pollution bulletin. 2006;53(5-7):350-360. Available at: http://dx.doi.org/10.1016/j.marpolbul.2005.11.014.

Coelho HS, Neves RR, Leitão PC, Martins H, Santos AP. The slope current along the western European margin : A numerical investigation. Bol. Inst. Esp. Oceanogr. 1999;15(1-4):61-72.

Coelho H, Neves R, White M, Leitao P, Santos A. A model for ocean circulation on the Iberian coast. Journal of Marine Systems. 2002;32(1-3):153-179. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0924796302000325.

deCastro M, Gómez-Gesteira M, Alvarez I, Prego R. Negative estuarine circulation in the Ria of Pontevedra (NW Spain). Estuarine, Coastal and Shelf Science. 2004;60(2):301-312. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0272771404000228.

deCastro M, Gómez-Gesteira M, Prego R, Neves R. Wind influence on water exchange between the ria of Ferrol (NW Spain) and the shelf. Estuarine, Coastal and Shelf Science. 2003;56(5-6):1055-1064. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0272771402003025.

Genio L, Sousa a, Vaz N, Dias J, Barroso C. Effect of low salinity on the survival of recently hatched veliger of Nassarius reticulatus (L.) in estuarine habitats: A case study of Ria de Aveiro. Journal of Sea Research. 2008;59(3):133-143. Available at: http://linkinghub.elsevier.com/retrieve/pii/S1385110107000986.

Gómez-Gesteira M, Montero P, Prego R, et al. A two-dimensional particle tracking model for pollution dispersion in A Coruña and Vigo Rias (NW Spain). Oceanologica Acta. 1999;22:167-177. Available at: http://dx.doi.org/10.1016/S0399-1784(99)80043-7.

Huthnance J, Coelho H, Griffiths C, et al. Physical structures, advection and mixing in the region of Goban spur. Deep Sea Research Part II: Topical Studies in Oceanography. 2001;48(14-15):2979-3021. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0967064501000303.

Janeiro J, Fernandes E, Martins F, Fernandes R. Wind and freshwater influence over hydrocarbon dispersal on Patos Lagoon, Brazil. Marine pollution bulletin. 2008;56(4):650-65. Available at: http://dx.doi.org/10.1016/j.marpolbul.2008.01.011.

Leitão P, Coelho H, Santos a, Neves R. Modelling the main features of the Algarve coastal circulation during July 2004: A downscaling approach. Journal of Atmospheric & Ocean Science. 2005;10(4):421-462. Available at: http://www.informaworld.com/openurl?genre=article&doi=10.1080/17417530601127704&magic=crossref%7C%7CD404A21C5BB053405B1A640AFFD44AE3.

Malhadas MS, Leitão PC, Silva A, Neves R. Effect of coastal waves on sea level in Óbidos Lagoon, Portugal. Continental Shelf Research. 2009;29(9):1240-1250. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0278434309000739.

Malhadas MS, Neves RJ, Leitão PC, Silva A. Influence of tide and waves on water renewal in Óbidos Lagoon, Portugal. Ocean Dynamics. 2009;60(1):41-55. Available at: http://www.springerlink.com/index/10.1007/s10236-009-0240-3.

Malhadas MS, Silva A, Leitão PC, Neves R. Effect of the Bathymetric Changes on the Hydrodynamic and Residence Time in Óbidos Lagoon (Portugal). Journal of Coastal Research. 2009;SI(56):549-553. Available at: http://e-geo.fcsh.unl.pt/ICS2009/_docs/ICS2009_Volume_I/549.553_M.S.Malhadas_ICS2009.pdf.

Marín VH, Campuzano FJ. Un modelo hidrodinámico-barotrópico para los fiordos australes de Chile entre los 41° S y los 46° S. Ciencia y Tecnología del Mar. 2008;31(2): 125-136. Available at: http://redalyc.uaemex.mx/src/inicio/ArtPdfRed.jsp?iCve=62412167007. (Spanish).

Martins F, Leitão P, Neves R. Simulating vertical water mixing in homogeneous estuaries : the SADO Estuary case. Hydrobiologia. 2002;475/476:221-227. Available at: http://dx.doi.org/10.1023/A:1020369431924.

Martins F, Leitão P, Silva A, Neves R. 3D modelling in the Sado estuary using a new generic vertical discretization approach. Oceanologica Acta. 2001;24(Supplement 1):51-62. Available at: http://dx.doi.org/10.1016/S0399-1784(01)00092-5.

Mateus M, Neves R. Evaluating light and nutrient limitation in the Tagus estuary using a process-oriented ecological model. Journal of Marine Engineering and Technology. 2008;12A:43-54.

Miranda R, Leitão PC, Coelho HS, Martins H, Neves RR. Transport and mixing simulation along the continental shelf edge using a Lagrangian approach. Bol. Inst. Esp. Oceanogr. 1999;15(1-4):39-60.

Montero P, Gómez-Gesteira M, Taboada JJ, et al. On residual circulation of the Ria of Vigo, using a 3-D baroclinic model. Bol. Inst. Esp. Oceanogr. 1999;15(1-4):31-38. Available at: http://digital.csic.es/bitstream/10261/25134/1/15_031-038.pdf.

Nobre A, Ferreira J, Newton A, et al. Management of coastal eutrophication: Integration of field data, ecosystem-scale simulations and screening models. Journal of Marine Systems. 2005;56(3-4):375-390. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0924796305000400.

Portela LI, Neves R. Numerical modelling of suspended sediment transport in tidal estuaries: A comparison between the Tagus (Portugal) and the Scheldt (Belgium-the Netherlands). Netherlands Journal of Aquatic Ecology. 1994;28(3-4):329-335. Available at: http://www.springerlink.com/index/10.1007/BF02334201.

Ruiz-Villarreal M, Montero P, Taboada JJ, et al. Hydrodynamic model study of the Ria de Pontevedra under estuarine conditions. Estuarine, Coastal and Shelf Science. 2002;54(1):101-113. Available at: http://linkinghub.elsevier.com/retrieve/pii/S027277140190825X.

Santos A, Martins H, Coelho H, Leitão PC, Neves R. A circulation model for the European ocean margin. Applied Mathematical Modelling. 2002;26(5):563-582. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0307904X01000695.

Santos A, Nogueira J, Martins H. Survival of sardine larvae off the Atlantic Portuguese coast: a preliminary numerical study. ICES Journal of Marine Science. 2005;62(4):634-644. Available at: http://icesjms.oxfordjournals.org/cgi/doi/10.1016/j.icesjms.2005.02.007.

Saraiva S, Pina P, Martins F, et al. Modelling the influence of nutrient loads on Portuguese estuaries. Hydrobiologia. 2007;587(1):5-18. Available at: http://www.springerlink.com/index/10.1007/s10750-007-0675-9.

Taboada J. Evaluation of the Seasonal Variations in the Residual Circulation in the Ría of Vigo (NW Spain) by Means of a 3D Baroclinic Model. Estuarine, Coastal and Shelf Science. 1998;47(5):661-670. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0272771498903857.

Tironi A, Marin VH, Campuzano FJ. A management tool for assessing aquaculture environmental impacts in Chilean Patagonian Fjords: integrating hydrodynamic and pellets dispersion models. Environmental management. 2010;45(5):953-62. Available at: http://dx.doi.org/10.1007/s00267-010-9467-5

Trancoso AR, Braunschweig F, Chambel Leitão P, Obermann M, Neves R. An advanced modelling tool for simulating complex river systems. The Science of the total environment. 2009;407(8):3004-16. Available at: http://dx.doi.org/10.1016/j.scitotenv.2009.01.015.

Trancoso AR, Saraiva S, Fernandes L, et al. Modelling macroalgae using a 3D hydrodynamic-ecological model in a shallow, temperate estuary. Ecological Modelling. 2005;187(2-3):232-246. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0304380005000918.

Tzoraki O, Nikolaidis NP, Trancoso R. A reach-scale biogeochemical model for temporary rivers. Hydrological Processes. 2009;23(2):272-283. Available at: http://dx.doi.org/10.1002/hyp.7138.

Vaz N, Dias JM, Leitão P, Martins I. Horizontal patterns of water temperature and salinity in an estuarine tidal channel: Ria de Aveiro. Ocean Dynamics. 2005;55(5-6):416-429. Available at: http://www.springerlink.com/index/10.1007/s10236-005-0015-4.

Vaz N, Dias JM, Leitão PC, Nolasco R. Application of the Mohid-2D model to a mesotidal temperate coastal lagoon. Computers & Geosciences. 2007;33(9):1204-1209. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0098300407000763.

Vaz N, Dias JM, Leitão PC. Three-dimensional modelling of a tidal channel: The Espinheiro Channel (Portugal). Continental Shelf Research. 2009;29(1):29-41. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0278434307003330.

Vaz N, Leitão PC, Dias JM. Channel-ocean exchange driven by tides and river flow: Espinheiro Channel (Portugal). Water. 2007;SI(50):1000-1004. Available at: http://www.griffith.edu.au/conference/ics2007/pdf/ICS182.pdf.

Viegas CN, Nunes S. Streams contribution on bathing water quality after rainfall events in Costa do Estoril- a tool to implement an alert system for bathing water quality. 2009;SI(56):1691-1695. Available at: http://e-geo.fcsh.unl.pt/ICS2009/_docs/ICS2009_Volume_II/1691.1695_C.Viegas_ICS2009.pdf.

Conference Proceedings

Ruiz-Villarreal M, Coelho H, Díaz G, Nogueira J. Slope current in the Cantabrian: Observations and modeling of seasonal variability and interaction with Aviles Canyon. ICES CM 2004/N:12. In: ICES CM.Vol 12. Nice (France).; 2004. Available at: http://www.ices.dk/products/CMdocs/2004/N/N1204.pdf.

Book Chapters

Campuzano, F.J., Leitão P.C., Gonçalves, M.I., Marín, V.H. and Tironi, A. (2008). Hydrodynamical vertical 2D model for the Aysén Fjord, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 555-566.

Campuzano, F.J., Marín, V.H., Tironi, A. and Leitão P.C. (2008). Ecological conceptual model for a southern Chilean fjord: The Aysén Fjord case study, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 567-579.

Campuzano, F.J., Pierini, J.O. and Leitão, P.C. (2008). Hydrodynamics and sediments in Bahía Blanca estuary: Data analysis and modelling, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 483-503.

Mateus, M. and Campuzano, F.J. (2008). The DPSIR framework applied to the Integrated Management of Coastal Areas, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 29-42.

Marín, V.H., Tironi, A., Paredes, M.A. and Campuzano, F. (2008). The estuarine system of the Aysén Fjord, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 333-339.

Neves, R., Coelho, H., Taborda, R. and Pina, P. (2002). Physical processes and modelling at ocean margins, In: Ocean Margin Systems, Wefer, G., Billett, D., Hebbeln, D., Jørgensen, B.B., Schlüter, M., van Weering, T. (eds.) Springer-Verlag Berlin Heidelberg pp 99-124. Available at: [Google Books]

Pierini, J.O., Campuzano, F., Marcovecchio, J. and Perillo, G.M.E. (2008). The application of MOHID to assess the potential effect of sewage discharge system at Bahía Blanca estuary (Argentina), In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 515-522.

Pierini, J.O., Marcovecchio, J., Campuzano, F. and Perillo, G.M.E. (2008). Evolution of salinity and temperature in Bahía Blanca estuary, Argentina, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 505-513.

Pierini, J.O., Marcovecchio, J., Campuzano, F. and Perillo, G.M.E. (2008). MOHID oil spill in coastal zones: A case study in Bahía Blanca estuary (Argentina), In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 523-528.

Tironi, A., Marin, V.H. and Campuzano, F. (2008). A management tool for salmon aquaculture: Integrating MOHID and GIS applications for local waste management, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 585-595.

Thesis

Antunes I (2000). Modelação Matemática da Qualidade da Água no Estuário do Tejo. MSc dissertation thesis. Technical University of Lisbon.

Barão L (2007). Carbon, Nitrogen and Phosphorus Soil Cycle Modeling. MSc dissertation thesis. Technical University of Lisbon.

Bernardes B (2007). Hydrodynamical and ecological modelling of the North Sea. MSc dissertation thesis. Technical University of Lisbon.

Braunschweig F (2001). Generalização de um modelo de circulação costeira para albufeiras. MSc dissertation thesis. Technical University of Lisbon.

Canas A (2009). Modelling and Data Assimilation Techniques for Operational Hydrodynamic Forecast in Tagus Estuary. PhD thesis. Technical University of Lisbon.

Coelho H (2002). Modelação de Processos Físicos Relacionados com a Circulação Oceânica na Margem Continental Ibérica. PhD thesis. Technical University of Lisbon.

Coelho H (1996).Modelação Numérica da Turbulência Oceânica. MSc dissertation thesis. Technical University of Lisbon.

de Clippele J (1998). Cohesive Sediment Transport in the Tagus Estuary. MSc dissertation thesis. Diplôme d’Etudes Approfondies Européen en Modélisation de l’Environnement Marin.

Duarte S (2001). Bactérias Marinhas, sua importância e efeitos no ciclo dos nutrientes - Modelo Ecológico. MSc dissertation thesis. Technical University of Lisbon.

Fernandes L (2005).Modelling of Arsenic Dynamics in the Tagus Estuary. MSc dissertation thesis. Technical University of Lisbon.

Fernandes R (2005). Modelação Operacional no Estuário do Tejo. MSc dissertation thesis. Technical University of Lisbon.

Fontes C L (2000). Modelação Matemática de Processos Diagenéticos. MSc dissertation thesis. Technical University of Lisbon.

Garcia A C (2008). Fine Sediments Resuspension Processes and transport in Nazaré Submarine Canyon. PhD thesis. Technical University of Lisbon.

Laran S (2000). A Theoretical Model of Pelagic Ecosystem and Nitrogen Waste in a Aquaculturing Pound. Application to the Rearing of sparus aurata L. and dicentrarchus labrax L. in the Sado Estuary (Portugal). MSc dissertation thesis. Université de Liège.

Leitão P C (2003). Integração de Escalas e de Processos na Modelação no Ambiente Marinho. PhD thesis. Technical University of Lisbon.

Leitão P C (1996). Modelo de Dispersão Lagrangeano Tridimensional. MSc dissertation thesis. Technical University of Lisbon.

Martins F A (2000). Modelação Matemática Tridimensional de Escoamentos Costeiros e Estuarinos usando uma abordagem de Coordenada Vertical Genérica. PhD thesis. Technical University of Lisbon.

Mateus M (1999). Modelação do Ciclo Biogeoquímico do Azoto na Zona do Cabo de S. Vicente. MSc dissertation thesis. Technical University of Lisbon.

Miranda R (1997). Nitrogen Biogeochemical Cycle Modeling In The North Atlantic Ocean. MSc dissertation thesis. Technical University of Lisbon.

Monteiro R (2001). Fish Growth Modelling - Growth of European anchovy (Engraulis encrasicolus) in the Tagus Estuary, Portugal. MSc dissertation thesis. Diplome D'Etudes Approfondies Europeen en Modelisation de L'Environment Marin.

Montero P (1999). Estudio de la hidrodinámica de la Ría de vigo mediante un modelo de volúmenes finitos. PhD thesis. Universidad de Santiago de Compostela.

Nogueira (2007). Estudo numérico do recrutamento de pequenos peixes pelágicos na Costa Ibérica. MSc dissertation thesis. Technical University of Lisbon.

Obermann M (2007). Nutrient dynamics in temporary waters of Mediterranean catchments. PhD thesis. University of Hannover.

Pina P (2001). An integrated approach to study the Tagus estuary water quality. MSc dissertation thesis. Technical University of Lisbon.

Rodrigues V (1997). Modelação Do Transporte E Dispersão De Constituintes Em Zonas Costeiras. MSc dissertation thesis. Technical University of Lisbon.

Ruiz-Villareal M (2000). Parameterization of turbulence in the ocean and application of a 3D model to the ria de Pontevedra. PhD thesis. Universidad de Santiago de Compostela.

Saraiva S (2005). Modelação Ecológica da Ria de Aveiro: o papel das macroalgas. MSc dissertation thesis. Technical University of Lisbon.

Silva A (1991). Modelação Matemática Não Linear de Ondas de Superfície e de Correntes Litorais. PhD thesis. Technical University of Lisbon.

Reports

Manuals