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(Fertilization Parameters File)
(Module WaterProperties)
 
(28 intermediate revisions by the same user not shown)
Line 7: Line 7:
  
 
|-
 
|-
! scope="col" |Project
 
! scope="col" |Module
 
 
! scope="col" |Keyword
 
! scope="col" |Keyword
 
! scope="col" |Keyword description
 
! scope="col" |Keyword description
Line 17: Line 15:
 
! scope="col" |Type
 
! scope="col" |Type
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|BIOSI_DECAY_RATE
 
|BIOSI_DECAY_RATE
 
|Biogenic silica dissolution rate
 
|Biogenic silica dissolution rate
Line 27: Line 23:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|DIATOMS
 
|DIATOMS
 
|Compute diatoms mortality
 
|Compute diatoms mortality
Line 37: Line 31:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|DIATOMS_MORTALITY
 
|DIATOMS_MORTALITY
 
|Diatoms mortality rate when deposited
 
|Diatoms mortality rate when deposited
Line 47: Line 39:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|DIATOMS_NC_RATIO
 
|DIATOMS_NC_RATIO
 
|Diatoms Nitrogen/Carbon ratio
 
|Diatoms Nitrogen/Carbon ratio
Line 57: Line 47:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|DIATOMS_PC_RATIO
 
|DIATOMS_PC_RATIO
 
|Diatoms Phosphorus/Carbon ratio
 
|Diatoms Phosphorus/Carbon ratio
Line 67: Line 55:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|DIATOMS_SIC_RATIO
 
|DIATOMS_SIC_RATIO
 
|Diatoms Silica/Carbon ratio
 
|Diatoms Silica/Carbon ratio
Line 77: Line 63:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|DT
 
|DT
 
|Time step to compute benthic biogeochemical processes
 
|Time step to compute benthic biogeochemical processes
Line 87: Line 71:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|MIN_OXYGEN
 
|MIN_OXYGEN
 
|Minimum oxygen concentration for mineralization to occur
 
|Minimum oxygen concentration for mineralization to occur
Line 97: Line 79:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|NC_RATIO
 
|NC_RATIO
 
|Nitrogen/Carbon ratio of organic matter
 
|Nitrogen/Carbon ratio of organic matter
Line 107: Line 87:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|NITROGEN
 
|NITROGEN
 
|Compute nitrogen processes
 
|Compute nitrogen processes
Line 117: Line 95:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|OXYGEN
 
|OXYGEN
 
|Compute oxygen processes
 
|Compute oxygen processes
Line 127: Line 103:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|PC_RATIO
 
|PC_RATIO
 
|Phosphorus/Carbon ratio of organic matter
 
|Phosphorus/Carbon ratio of organic matter
Line 137: Line 111:
 
|
 
|
 
|-
 
|-
| rowspan="2" |Base 1
 
| rowspan="2" |Benthos
 
 
| rowspan="2" |PELAGIC_MODEL
 
| rowspan="2" |PELAGIC_MODEL
 
| rowspan="2" |Pelagic model name to which Module Benthos will be coupled
 
| rowspan="2" |Pelagic model name to which Module Benthos will be coupled
 
|LifeModel
 
|LifeModel
 
|
 
|
| rowspan="2" |
 
 
| rowspan="2" |
 
| rowspan="2" |
 
| rowspan="2" |
 
| rowspan="2" |
Line 150: Line 121:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|PHOSPHORUS
 
|PHOSPHORUS
 
|Compute phosphorus processes
 
|Compute phosphorus processes
Line 160: Line 129:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|PHYTO
 
|PHYTO
 
|Compute phytoplankton mortality
 
|Compute phytoplankton mortality
Line 170: Line 137:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|PHYTO_MORTALITY
 
|PHYTO_MORTALITY
 
|Phytoplankton mortality rate when deposited
 
|Phytoplankton mortality rate when deposited
Line 180: Line 145:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|PHYTO_NC_RATIO
 
|PHYTO_NC_RATIO
 
|Phytoplankton Nitrogen/Carbon ratio
 
|Phytoplankton Nitrogen/Carbon ratio
Line 190: Line 153:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|PHYTO_PC_RATIO
 
|PHYTO_PC_RATIO
 
|Phytoplankton Nitrogen/Carbon ratio
 
|Phytoplankton Nitrogen/Carbon ratio
Line 200: Line 161:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|PON_DECAY_RATE
 
|PON_DECAY_RATE
 
|Particulate organic nitrogen mineralization rate
 
|Particulate organic nitrogen mineralization rate
Line 210: Line 169:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|PON_DECAY_TFACTOR
 
|PON_DECAY_TFACTOR
 
|Particulate Organic Nitrogen temperature influence factor in mineralization Rate
 
|Particulate Organic Nitrogen temperature influence factor in mineralization Rate
Line 220: Line 177:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|POP_DECAY_RATE
 
|POP_DECAY_RATE
 
|Particulate organic phosphorus mineralization rate  
 
|Particulate organic phosphorus mineralization rate  
Line 230: Line 185:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|POP_DECAY_TFACTOR
 
|POP_DECAY_TFACTOR
 
|Particulate Organic Phosphorus temperature influence factor in mineralization Rate
 
|Particulate Organic Phosphorus temperature influence factor in mineralization Rate
Line 240: Line 193:
 
|
 
|
 
|-
 
|-
| Base 1
 
|Benthos
 
 
|SILICA
 
|SILICA
 
|
 
|
Line 304: Line 255:
 
|ALTERNATIVE_LOCATIONS
 
|ALTERNATIVE_LOCATIONS
 
|Activates the automatic search for alternative locations, when the discharge point is not a covered point
 
|Activates the automatic search for alternative locations, when the discharge point is not a covered point
 +
|0/1
 +
|Inactive/Active
 +
|0
 
|
 
|
 +
|Boolean
 +
|-
 +
| Base 1
 +
|Discharges
 +
|COORD_X
 +
|Longitude of the discharge in geographic coordinates
 
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|
 +
|Real
 +
|-
 +
| Base 1
 +
|Discharges
 +
|COORD_Y
 +
|Activates the automatic search for alternative locations, when the discharge point is not a covered point
 +
|Latitude of the discharge in geographic coordinates
 +
|
 +
|
 +
|
 +
|Real
 
|-
 
|-
 
| Base 1
 
| Base 1
Line 378: Line 349:
 
|
 
|
 
|
 
|
 +
|
 +
|-
 +
| rowspan="3" |Base 1
 +
| rowspan="3" |Discharges
 +
| rowspan="3" |FLOW_DISTRIBUTION
 +
| rowspan="3" |Chooses the hydrodynamic approximation to be solved in the momentum equation
 +
|by cell
 +
|
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
|-
 +
|by water column
 +
|
 +
|-
 +
|by volume
 
|
 
|
 
|-
 
|-
Line 389: Line 376:
 
|
 
|
 
|
 
|
 +
|-
 +
| Base 1
 +
|Discharges
 +
|IGNORE_ON
 +
|This keyword must be active for MOHID MPI runs
 +
|0/1
 +
|Inactive/Active
 +
|0
 +
|
 +
|Boolean
 
|-
 
|-
 
| Base 1
 
| Base 1
Line 398: Line 395:
 
|
 
|
 
|
 
|
|
+
|Integer
 
|-
 
|-
 
| Base 1
 
| Base 1
Line 408: Line 405:
 
|
 
|
 
|
 
|
|
+
|Integer
 
|-
 
|-
 
| Base 1
 
| Base 1
Line 418: Line 415:
 
|
 
|
 
|
 
|
|
+
|Integer
 
|-
 
|-
 
| Base 1
 
| Base 1
Line 1,491: Line 1,488:
 
! scope="col" |Units
 
! scope="col" |Units
 
! scope="col" |Type
 
! scope="col" |Type
 +
|-
 +
| Base 1
 +
|LightExtinction
 +
|COEF_PARSONS_PORTELA
 +
|Correct Default Coefficient for Parsons Portela SW Radiation parameterisation
 +
|Needs SW_EXTINCTION_TYPE: 4
 +
|
 +
|0.04
 +
|
 +
|Real
 
|-
 
|-
 
| Base 1
 
| Base 1
Line 1,543: Line 1,550:
 
|0.05
 
|0.05
 
|
 
|
|
+
|Real
 
|-
 
|-
 
| Base 1
 
| Base 1
Line 4,707: Line 4,714:
 
|
 
|
 
|
 
|
 +
|
 +
|
 +
|
 +
|-
 +
| Base 2
 +
|Geometry
 +
|REMOVE_LAND_BOTTOM_LAYERS
 +
|Remove bottom layers with no water cells
 
|
 
|
 
|
 
|
Line 4,764: Line 4,779:
 
|SIGMATOP
 
|SIGMATOP
 
|A Sigma Coordinate which is calculated downwards from the Digital Terrain (MOHID Land only). Needs Normal Sigma Below
 
|A Sigma Coordinate which is calculated downwards from the Digital Terrain (MOHID Land only). Needs Normal Sigma Below
|-
 
| Base 2
 
|Geometry
 
|REMOVE_LAND_BOTTOM_LAYERS
 
|Keywork do remove bottom layers with no water cells
 
|
 
|
 
|
 
 
|}
 
|}
  
Line 6,152: Line 6,159:
 
|
 
|
 
|Boolean
 
|Boolean
 +
|}
 +
 +
=== Module Irrigation ===
 +
[https://github.com/Mohid-Water-Modelling-System/Mohid/blob/master/Software/MOHIDLand/ModuleIrrigation.F90 Source Code]
 +
{| class="wikitable"
 +
|-
 +
! scope="col" |Project
 +
! scope="col" |Module
 +
! scope="col" |Keyword
 +
! scope="col" |Keyword description
 +
! scope="col" |Options
 +
! scope="col" |Option description
 +
! scope="col" |Default Value
 +
! scope="col" |Units
 +
! scope="col" |Type
 
|-
 
|-
 
| Land
 
| Land
|Basin
+
|Irrigation
|
+
|ACTIVE
 
|
 
|
 
|
 
|
 
|
 
|
 +
|1
 
|
 
|
 +
|Boolean
 +
|-
 +
| Land
 +
|Irrigation
 +
|END_INSTANT_THRESHOLD
 
|
 
|
 +
|0-23
 
|
 
|
 +
|23.0
 +
|hours
 +
|Integer
 
|-
 
|-
 
| Land
 
| Land
|Basin
+
|Irrigation
|
+
|GEAR_DEBIT
|
 
|
 
|
 
 
|
 
|
 
|
 
|
 
|
 
|
 +
|10.0
 +
|mm
 +
|Real
 
|-
 
|-
 
| Land
 
| Land
|Basin
+
|Irrigation
|
+
|GEAR_EFFICIENCY
|
 
|
 
 
|
 
|
 
|
 
|
 
|
 
|
 +
|0.85
 
|
 
|
 +
|Real
 
|-
 
|-
 
| Land
 
| Land
|Basin
+
|Irrigation
|
+
|GEAR_MAX_VEL
|
 
|
 
 
|
 
|
 
|
 
|
 
|
 
|
 +
|4.0
 
|
 
|
 +
|Real
 
|-
 
|-
 
| Land
 
| Land
|Basin
+
|Irrigation
 +
|GEAR_MIN_VEL
 
|
 
|
 
|
 
|
 
|
 
|
 +
|0.2
 
|
 
|
 +
|Real
 +
|-
 +
| rowspan="5"| Land
 +
| rowspan="5"|Irrigation
 +
| rowspan="5"|GEAR_TYPE
 +
| rowspan="5"|
 +
|1
 +
|CenterPivot
 +
| rowspan="5"|1
 +
| rowspan="5"|
 +
| rowspan="5"|Integer
 +
|-
 +
|2
 +
|LinearPivot
 +
|-
 +
|3
 +
|Sprinkler
 +
|-
 +
|4
 +
|GravitySystem
 +
|-
 +
|5
 +
|DripIrrigation
 +
|-
 +
| Land
 +
|Irrigation
 +
|HEAD_TARGET
 
|
 
|
 
|
 
|
 
|
 
|
 +
| -10.0
 +
|m
 +
|Real
 
|-
 
|-
 
| Land
 
| Land
|Basin
+
|Irrigation
 +
|HEAD_THRESHOLD
 
|
 
|
 
|
 
|
 
|
 
|
|
+
| -6.0
|
+
|m
|
+
|Real
|
 
|}
 
 
 
=== Module Irrigation ===
 
[https://github.com/Mohid-Water-Modelling-System/Mohid/blob/master/Software/MOHIDLand/ModuleIrrigation.F90 Source Code]
 
{| class="wikitable"
 
|-
 
! scope="col" |Project
 
! scope="col" |Module
 
! scope="col" |Keyword
 
! scope="col" |Keyword description
 
! scope="col" |Options
 
! scope="col" |Option description
 
! scope="col" |Default Value
 
! scope="col" |Units
 
! scope="col" |Type
 
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|ACTIVE
+
|MAX_CONSECUTIVE_DAYS
 
|
 
|
 
|
 
|
 
|
 
|
|1
+
|2
|
+
|days
|Boolean
+
|Integer
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|END_INSTANT_THRESHOLD
+
|MAX_DAILY_IRRIGATION_TIME
 +
|
 
|
 
|
|0-23
 
 
|
 
|
|23.0
+
|86400.0
|hours
+
|seconds
 
|Integer
 
|Integer
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|GEAR_DEBIT
+
|MAX_DEPTH_TO_CHECK
 
|
 
|
 
|
 
|
 
|
 
|
|10.0
+
|0.2
|mm
+
|m
 
|Real
 
|Real
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|GEAR_EFFICIENCY
+
|MAX_SATURATED_FRACTION
 
|
 
|
 +
|0-1
 
|
 
|
|
+
|0.3
|0.85
 
 
|
 
|
 
|Real
 
|Real
 +
|-
 +
| rowspan="3"| Land
 +
| rowspan="3"|Irrigation
 +
| rowspan="3"|METHOD
 +
| rowspan="3"|
 +
|1
 +
|Fixed Irrigation (Fixed irrigation is provided by the user)
 +
| rowspan="3"|1
 +
| rowspan="3"|
 +
| rowspan="3"|Integer
 +
|-
 +
|2
 +
|IrrigationBySteps
 +
|-
 +
|3
 +
|ContinuousIrrigation
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|GEAR_MAX_VEL
+
|MIN_INTERVAL_BETWEEN_EVENTS
 
|
 
|
 
|
 
|
 
|
 
|
|4.0
+
|86400.0
|
+
|seconds
|Real
+
|Integer
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|GEAR_MIN_VEL
+
|NAME
 +
|
 
|
 
|
 
|
 
|
 
|
 
|
|0.2
 
 
|
 
|
|Real
+
|String
|-
 
| rowspan="5"| Land
 
| rowspan="5"|Irrigation
 
| rowspan="5"|GEAR_TYPE
 
| rowspan="5"|
 
|1
 
|CenterPivot
 
| rowspan="5"|1
 
| rowspan="5"|
 
| rowspan="5"|Integer
 
|-
 
|2
 
|LinearPivot
 
|-
 
|3
 
|Sprinkler
 
|-
 
|4
 
|GravitySystem
 
|-
 
|5
 
|DripIrrigation
 
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|HEAD_TARGET
+
|SATURATION_THRESHOLD
 
|
 
|
 +
|0-1
 
|
 
|
 +
|0.9
 
|
 
|
| -10.0
 
|m
 
 
|Real
 
|Real
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|HEAD_THRESHOLD
+
|SINGLE_SYSTEM
 
|
 
|
 +
|0/1
 
|
 
|
 +
|0
 
|
 
|
| -6.0
+
|Boolean
|m
+
|-
|Real
 
|-
 
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|MAX_CONSECUTIVE_DAYS
+
|START_INSTANT_THRESHOLD
 
|
 
|
 +
|0-23
 
|
 
|
|
+
|0.0
|2
+
|hours
|days
 
 
|Integer
 
|Integer
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|MAX_DAILY_IRRIGATION_TIME
+
|START_TIME
 
|
 
|
 
|
 
|
 
|
 
|
|86400.0
 
|seconds
 
|Integer
 
|-
 
| Land
 
|Irrigation
 
|MAX_DEPTH_TO_CHECK
 
 
|
 
|
 
|
 
|
 
|
 
|
|0.2
 
|m
 
|Real
 
 
|-
 
|-
 
| Land
 
| Land
 
|Irrigation
 
|Irrigation
|MAX_SATURATED_FRACTION
+
|STOP_TIME
 
|
 
|
|0-1
 
 
|
 
|
|0.3
 
 
|
 
|
|Real
 
|-
 
| rowspan="3"| Land
 
| rowspan="3"|Irrigation
 
| rowspan="3"|METHOD
 
| rowspan="3"|
 
|1
 
|Fixed Irrigation (Fixed irrigation is provided by the user)
 
| rowspan="3"|1
 
| rowspan="3"|
 
| rowspan="3"|Integer
 
|-
 
|2
 
|IrrigationBySteps
 
|-
 
|3
 
|ContinuousIrrigation
 
|-
 
| Land
 
|Irrigation
 
|MIN_INTERVAL_BETWEEN_EVENTS
 
 
|
 
|
 
|
 
|
 
|
 
|
|86400.0
+
|}
|seconds
+
 
|Integer
+
=== Module ModulePorousMedia ===
 +
[https://github.com/Mohid-Water-Modelling-System/Mohid/blob/master/Software/MOHIDLand/ModulePorousMedia.F90 Source Code]
 +
{| class="wikitable"
 +
|-
 +
! scope="col" |Project
 +
! scope="col" |Module
 +
! scope="col" |Keyword
 +
! scope="col" |Keyword description
 +
! scope="col" |Options
 +
! scope="col" |Option description
 +
! scope="col" |Default Value
 +
! scope="col" |Units
 +
! scope="col" |Type
 +
 
 
|-
 
|-
 
| Land
 
| Land
|Irrigation
+
|PorousMedia
|NAME
+
|ALPHA
 
|
 
|
 
|
 
|
Line 6,404: Line 6,427:
 
|
 
|
 
|
 
|
|String
+
|Real
 
|-
 
|-
 
| Land
 
| Land
|Irrigation
+
|PorousMedia
|SATURATION_THRESHOLD
+
|BOTTOM_FILE 
 +
|Path to Bottom Topography File
 
|
 
|
|0-1
 
 
|
 
|
|0.9
+
| -
 
|
 
|
|Real
+
|String
 
|-
 
|-
 
| Land
 
| Land
|Irrigation
+
|PorousMedia
|SINGLE_SYSTEM
+
|CALC_DRAINAGE_FLUX
 
|
 
|
 
|0/1
 
|0/1
 
|
 
|
|0
+
|1
 
|
 
|
 
|Boolean
 
|Boolean
 
|-
 
|-
 
| Land
 
| Land
|Irrigation
+
|PorousMedia
|START_INSTANT_THRESHOLD
+
|CALC_HORIZONTAL
|
 
|0-23
 
|
 
|0.0
 
|hours
 
|Integer
 
|-
 
| Land
 
|Irrigation
 
|START_TIME
 
|
 
|
 
|
 
 
|
 
|
 +
|0/1
 
|
 
|
 +
|1
 
|
 
|
 +
|Boolean
 
|-
 
|-
 
| Land
 
| Land
|Irrigation
+
|PorousMedia
|STOP_TIME
+
|COMPUTE_HYDRO_PRESSURE
 
|
 
|
 +
|0/1
 
|
 
|
 +
|1
 
|
 
|
|
+
|Boolean
|
 
|
 
|}
 
 
 
=== Module ModulePorousMedia ===
 
[https://github.com/Mohid-Water-Modelling-System/Mohid/blob/master/Software/MOHIDLand/ModulePorousMedia.F90 Source Code]
 
{| class="wikitable"
 
|-
 
! scope="col" |Project
 
! scope="col" |Module
 
! scope="col" |Keyword
 
! scope="col" |Keyword description
 
! scope="col" |Options
 
! scope="col" |Option description
 
! scope="col" |Default Value
 
! scope="col" |Units
 
! scope="col" |Type
 
 
 
 
|-
 
|-
 
| Land
 
| Land
 
|PorousMedia
 
|PorousMedia
|ALPHA
+
|COMPUTE_SOIL_FIELD
 
|
 
|
 +
|0/1
 
|
 
|
 +
|0
 
|
 
|
|
+
|Boolean
|
 
|Real
 
 
|-
 
|-
| Land
+
|rowspan=5| Land
|PorousMedia
+
|rowspan=5|PorousMedia
|BOTTOM_FILE 
+
|rowspan=5|CONDUTIVITYFACE  
|Path to Bottom Topography File
 
|
 
|
 
| -
 
|
 
|String
 
|-
 
| Land
 
|PorousMedia
 
|CALC_DRAINAGE_FLUX
 
|
 
|0/1
 
|
 
|1
 
|
 
|Boolean
 
|-
 
| Land
 
|PorousMedia
 
|CALC_HORIZONTAL
 
|
 
|0/1
 
|
 
|1
 
|
 
|Boolean
 
|-
 
| Land
 
|PorousMedia
 
|COMPUTE_HYDRO_PRESSURE
 
|
 
|0/1
 
|
 
|1
 
|
 
|Boolean
 
|-
 
| Land
 
|PorousMedia
 
|COMPUTE_SOIL_FIELD
 
|
 
|0/1
 
|
 
|0
 
|
 
|Boolean
 
|-
 
|rowspan=5| Land
 
|rowspan=5|PorousMedia
 
|rowspan=5|CONDUTIVITYFACE  
 
 
|rowspan=5|Way to interpolate conducivity face
 
|rowspan=5|Way to interpolate conducivity face
 
|1
 
|1
Line 8,551: Line 8,498:
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|FERTILIZER_ID
+
|AMMONIA_FRACTION_IN_MINERAL_N
 
|
 
|
 
|
 
|
Line 8,557: Line 8,504:
 
|  
 
|  
 
|  
 
|  
|Integer
+
|Real
 
|-  
 
|-  
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|FERTILIZER_NAME
+
|FERTILIZER_ID
 
|
 
|
 
|
 
|
Line 8,567: Line 8,514:
 
|  
 
|  
 
|  
 
|  
|String
+
|Integer
 
|-  
 
|-  
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|MINERAL_N_FRACTION_IN_FERTILIZER
+
|FERTILIZER_FRACTION_IN_SURFACE
 
|
 
|
 
|
 
|
Line 8,581: Line 8,528:
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|ORGANIC_N_FRACTION_IN_FERTILIZER
+
|FERTILIZER_NAME
 
|
 
|
 
|
 
|
Line 8,587: Line 8,534:
 
|  
 
|  
 
|  
 
|  
|Real
+
|String
 
|-  
 
|-  
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|AMMONIA_FRACTION_IN_MINERAL_N
+
|MINERAL_N_FRACTION_IN_FERTILIZER
 
|
 
|
 
|
 
|
Line 8,611: Line 8,558:
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|ORGANIC_P_FRACTION_IN_FERTILIZER
+
|ORGANIC_N_FRACTION_IN_FERTILIZER
 
|
 
|
 
|
 
|
Line 8,621: Line 8,568:
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|FERTILIZER_FRACTION_IN_SURFACE
+
|ORGANIC_P_FRACTION_IN_FERTILIZER
 
|
 
|
 
|
 
|
Line 8,646: Line 8,593:
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|VEGETATION_ID
+
|FEDDES_H1
|
+
|higher head for transpiration (saturation and oxygen loss)
|
 
|
 
|
 
|
 
|Integer
 
|-
 
|rowspan="3" |Land
 
|rowspan="3" |Vegetation
 
|rowspan="3" |FEDDES_TYPE
 
|rowspan="3" |
 
|1
 
|Normal
 
|rowspan="3" | 1
 
|rowspan="3" | -
 
|rowspan="3" |Integer
 
|-
 
|2
 
|With points
 
|-
 
|3
 
|Variable consoant the transpiration
 
|-
 
|Land
 
|Vegetation
 
|FEDDES_H1
 
|higher head for transpiration (saturation and oxygen loss)
 
 
|
 
|
 
|
 
|
Line 8,750: Line 8,671:
 
|Real
 
|Real
 
|-  
 
|-  
|rowspan="2" |Land
+
|rowspan="3" |Land
|rowspan="2" |Vegetation
+
|rowspan="3" |Vegetation
|rowspan="2" |USE_SALINITY
+
|rowspan="3" |FEDDES_TYPE
|rowspan="2" |
+
|rowspan="3" |
 
|1
 
|1
|Yes
+
|Normal
|rowspan="2" | 0
+
|rowspan="3" | 1
|rowspan="2" | -  
+
|rowspan="3" | -
|rowspan="2" |Boolean
+
|rowspan="3" |Integer
|-
+
|-
|0
+
|2
|No
+
|With points
 +
|-  
 +
|3
 +
|Variable consoant the transpiration
 
|-  
 
|-  
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|SALINITY_STRESS_THRESHOLD
+
|SALINITY_STRESS_SLOPE
 
|
 
|
 
|
 
|
Line 8,775: Line 8,699:
 
|Land
 
|Land
 
|Vegetation
 
|Vegetation
|SALINITY_STRESS_SLOPE
+
|SALINITY_STRESS_THRESHOLD
 
|
 
|
 
|
 
|
Line 8,798: Line 8,722:
 
|3  
 
|3  
 
|Min of all
 
|Min of all
 +
|-
 
|-  
 
|-  
|}
+
|rowspan="2" |Land
 
+
|rowspan="2" |Vegetation
==MOHID Water==
+
|rowspan="2" |USE_SALINITY
 
+
|rowspan="2" |
=== Module Assimilation===
+
|1
[https://github.com/Mohid-Water-Modelling-System/Mohid/blob/master/Software/MOHIDWater/ModuleAssimilation.F90 Source Code]
+
|Yes
{| class="wikitable"
+
|rowspan="2" | 0
 +
|rowspan="2" | -
 +
|rowspan="2" |Boolean
 +
|-
 +
|0
 +
|No
 +
|-
 +
|Land
 +
|Vegetation
 +
|VEGETATION_ID
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|Integer
 +
|}
 +
 
 +
==MOHID Water==
 +
 
 +
=== Module Assimilation===
 +
[https://github.com/Mohid-Water-Modelling-System/Mohid/blob/master/Software/MOHIDWater/ModuleAssimilation.F90 Source Code]
 +
{| class="wikitable"
 
|-
 
|-
 
! scope="col" |Project
 
! scope="col" |Project
Line 8,821: Line 8,768:
 
|COLD_RELAX_PERIOD
 
|COLD_RELAX_PERIOD
 
|Period of time along which relaxation has a linear increase
 
|Period of time along which relaxation has a linear increase
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,828: Line 8,778:
 
|DESCRIPTION
 
|DESCRIPTION
 
|Short description about the assimilation property
 
|Short description about the assimilation property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Assimilation
+
| rowspan="2" |Assimilation
 
| rowspan="2" |DIMENSION
 
| rowspan="2" |DIMENSION
 
| rowspan="2" |Number of dimensions of the assimilation field
 
| rowspan="2" |Number of dimensions of the assimilation field
 
|2
 
|2
 
|Two-Dimensional property
 
|Two-Dimensional property
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Assimilation
 
 
|3
 
|3
 
|Three-Dimensional property
 
|Three-Dimensional property
Line 8,847: Line 8,801:
 
|NAME
 
|NAME
 
|Name of the assimilation property
 
|Name of the assimilation property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,854: Line 8,811:
 
|OUTPUT_HDF
 
|OUTPUT_HDF
 
|Output HDF results for assimilation property
 
|Output HDF results for assimilation property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,861: Line 8,821:
 
|OUTPUT_TIME
 
|OUTPUT_TIME
 
|Vector with instants (starting from 0) when to perform outputs. The last number in the vector is the time step to perform the remaining outputs.  
 
|Vector with instants (starting from 0) when to perform outputs. The last number in the vector is the time step to perform the remaining outputs.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,868: Line 8,831:
 
|TIME_SERIE
 
|TIME_SERIE
 
|Output time series for assimilation property
 
|Output time series for assimilation property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,875: Line 8,841:
 
|TIME_SERIE_LOCATION
 
|TIME_SERIE_LOCATION
 
|Path to time serie locations file
 
|Path to time serie locations file
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Assimilation
+
| rowspan="3" |Assimilation
 
| rowspan="3" |TYPE_ZUV
 
| rowspan="3" |TYPE_ZUV
 
| rowspan="3" |Reference of the field to the grid.
 
| rowspan="3" |Reference of the field to the grid.
 
|U
 
|U
 
|Variable is referenced to the XX faces of the control volume
 
|Variable is referenced to the XX faces of the control volume
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Assimilation
 
 
|V
 
|V
 
|Variable is referenced to the YY faces of the control volume
 
|Variable is referenced to the YY faces of the control volume
 
|-
 
|-
| Water
 
|Assimilation
 
 
|Z
 
|Z
 
|Variable is defined in the center of the control volume
 
|Variable is defined in the center of the control volume
Line 8,899: Line 8,867:
 
|UNITS
 
|UNITS
 
|Assimilation property units
 
|Assimilation property units
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,931: Line 8,902:
 
|BOXFLUXES
 
|BOXFLUXES
 
|Path to boxes file. If specified in input data file, computes box integration based on the defined file.
 
|Path to boxes file. If specified in input data file, computes box integration based on the defined file.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,938: Line 8,912:
 
|COMPUTE_SHEAR_STRESS
 
|COMPUTE_SHEAR_STRESS
 
|Compute shear stress or read from file
 
|Compute shear stress or read from file
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,945: Line 8,922:
 
|CONSOLIDATION
 
|CONSOLIDATION
 
|Specifies if consolidation is to be computed
 
|Specifies if consolidation is to be computed
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,952: Line 8,932:
 
|CONSOLIDATION_DT
 
|CONSOLIDATION_DT
 
|Time step for consolidation
 
|Time step for consolidation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,959: Line 8,942:
 
|CONTINUOUS
 
|CONTINUOUS
 
|Speficies if initialization is based in previous run
 
|Speficies if initialization is based in previous run
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,966: Line 8,952:
 
|CSE_COEF
 
|CSE_COEF
 
|Coeficient to compute exponential increase of critical shear stress for erosion with depth
 
|Coeficient to compute exponential increase of critical shear stress for erosion with depth
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,973: Line 8,962:
 
|DECAYMENT
 
|DECAYMENT
 
|Computes porosity decayment (compaction) inside the sediment compartment
 
|Computes porosity decayment (compaction) inside the sediment compartment
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,980: Line 8,972:
 
|DECAYTIME
 
|DECAYTIME
 
|Decay factor for consolidation
 
|Decay factor for consolidation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,987: Line 8,982:
 
|INFINITE_CSE
 
|INFINITE_CSE
 
|Maximum critical shear stress for erosion
 
|Maximum critical shear stress for erosion
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 8,994: Line 8,992:
 
|MAX_THICKNESS
 
|MAX_THICKNESS
 
|Maximum layer thickness allowed for a sediment layer
 
|Maximum layer thickness allowed for a sediment layer
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,001: Line 9,002:
 
|MIN_THICKNESS
 
|MIN_THICKNESS
 
|Minimum thickness allowed for a sediment layer
 
|Minimum thickness allowed for a sediment layer
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,008: Line 9,012:
 
|OUTPUT_HDF
 
|OUTPUT_HDF
 
|Output HDF results
 
|Output HDF results
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,015: Line 9,022:
 
|OUTPUT_TIME
 
|OUTPUT_TIME
 
|Vector with instants (starting from 0) when to perform outputs. The last number in the vector is the time step to perform the remaining outputs.  
 
|Vector with instants (starting from 0) when to perform outputs. The last number in the vector is the time step to perform the remaining outputs.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,022: Line 9,032:
 
|SURFACE_CSE
 
|SURFACE_CSE
 
|Critical shear stress for erosion for the top layer
 
|Critical shear stress for erosion for the top layer
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,029: Line 9,042:
 
|TIME_SERIE
 
|TIME_SERIE
 
|Output time series
 
|Output time series
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,061: Line 9,077:
 
|CHS
 
|CHS
 
|Hindered settling concentration threshold
 
|Hindered settling concentration threshold
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,068: Line 9,087:
 
|DEPOSITION
 
|DEPOSITION
 
|Compute deposition for particulate property
 
|Compute deposition for particulate property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|FreeVerticalMovement
+
| rowspan="2" |FreeVerticalMovement
 
| rowspan="2" |FREEVERT_IMPEXP_ADV
 
| rowspan="2" |FREEVERT_IMPEXP_ADV
 
| rowspan="2" |Coeficient to compute vertical movement through implicit or explicit methods
 
| rowspan="2" |Coeficient to compute vertical movement through implicit or explicit methods
 
|0.0
 
|0.0
 
|Implicit
 
|Implicit
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|FreeVerticalMovement
 
 
|1.0
 
|1.0
 
|Explicit
 
|Explicit
Line 9,087: Line 9,110:
 
|KL
 
|KL
 
|Parameter to compute settling velocity based on cohesive sediment concentration
 
|Parameter to compute settling velocity based on cohesive sediment concentration
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,094: Line 9,120:
 
|KL1
 
|KL1
 
|Parameter to compute settling velocity based on cohesive sediment concentration
 
|Parameter to compute settling velocity based on cohesive sediment concentration
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,101: Line 9,130:
 
|M
 
|M
 
|Parameter to compute settling velocity based on cohesive sediment concentration
 
|Parameter to compute settling velocity based on cohesive sediment concentration
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,108: Line 9,140:
 
|ML
 
|ML
 
|Parameter to compute settling velocity based on cohesive sediment concentration
 
|Parameter to compute settling velocity based on cohesive sediment concentration
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,115: Line 9,150:
 
|SALTINT
 
|SALTINT
 
|Definition of free vertical movement being function of salinity
 
|Definition of free vertical movement being function of salinity
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,122: Line 9,160:
 
|SALTINTVALUE
 
|SALTINTVALUE
 
|Salinity limit. For salinity values smaller the settling velocity is zero. For salinity values greater then this limit the settling velocity is computed/prescribed.
 
|Salinity limit. For salinity values smaller the settling velocity is zero. For salinity values greater then this limit the settling velocity is computed/prescribed.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|FreeVerticalMovement
+
| rowspan="2" |FreeVerticalMovement
 
| rowspan="2" |WS_TYPE
 
| rowspan="2" |WS_TYPE
 
| rowspan="2" |Method to compute settling velocity
 
| rowspan="2" |Method to compute settling velocity
 
|1
 
|1
 
|Prescribe a constant settling velocity for particulate property
 
|Prescribe a constant settling velocity for particulate property
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|FreeVerticalMovement
 
 
|2
 
|2
 
|Compute settling velocity as function of cohesive sediment concentration
 
|Compute settling velocity as function of cohesive sediment concentration
|-
 
| Water
 
|FreeVerticalMovement
 
|ws_value
 
|
 
|
 
|
 
 
|-
 
|-
 
| Water
 
| Water
Line 9,173: Line 9,208:
 
|ADV_METHOD_H
 
|ADV_METHOD_H
 
|Defines the horizontal numerical method of advection.
 
|Defines the horizontal numerical method of advection.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,179: Line 9,217:
 
|Hydrodynamic
 
|Hydrodynamic
 
|ADV_METHOD_V
 
|ADV_METHOD_V
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,187: Line 9,228:
 
|ATM_PRESSURE
 
|ATM_PRESSURE
 
|Checks if the user wants to consider the effect of the Atmospheric Pressure
 
|Checks if the user wants to consider the effect of the Atmospheric Pressure
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Hydrodynamic
+
| rowspan="3" |Hydrodynamic
 
| rowspan="3" |ATM_PRESSURE_TYPE
 
| rowspan="3" |ATM_PRESSURE_TYPE
 
| rowspan="3" |Defines the atmospheric reference field
 
| rowspan="3" |Defines the atmospheric reference field
 
|0  
 
|0  
 
|no atmospheric reference field
 
|no atmospheric reference field
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|1
 
|1
 
|use "atmospheric pressure" from Module Atmosphere
 
|use "atmospheric pressure" from Module Atmosphere
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|2
 
|2
 
|use "mslp" (aka Mean Sea Level Pressure) from Module Atmosphere
 
|use "mslp" (aka Mean Sea Level Pressure) from Module Atmosphere
Line 9,211: Line 9,254:
 
|BAROCLINIC
 
|BAROCLINIC
 
|Checks if the user pretends to compute the baroclinic pressure
 
|Checks if the user pretends to compute the baroclinic pressure
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,217: Line 9,263:
 
|Hydrodynamic
 
|Hydrodynamic
 
|BAROCLINIC_METHOD
 
|BAROCLINIC_METHOD
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,224: Line 9,273:
 
|Hydrodynamic
 
|Hydrodynamic
 
|BAROCLINIC_OBC_DISCRET
 
|BAROCLINIC_OBC_DISCRET
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,231: Line 9,283:
 
|Hydrodynamic
 
|Hydrodynamic
 
|BAROCLINIC_POLIDEGREE
 
|BAROCLINIC_POLIDEGREE
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Hydrodynamic
+
| rowspan="3" |Hydrodynamic
 
| rowspan="3" |BAROCLINIC_RADIATION
 
| rowspan="3" |BAROCLINIC_RADIATION
 
| rowspan="3" |Check if the user wants to radiate internal tides
 
| rowspan="3" |Check if the user wants to radiate internal tides
 
|0
 
|0
 
|No radiation
 
|No radiation
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|1
 
|1
 
|Horizontal
 
|Horizontal
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|2
 
|2
 
|Vertical
 
|Vertical
Line 9,255: Line 9,309:
 
|Hydrodynamic
 
|Hydrodynamic
 
|BAROCLINIC_WAVE_DT
 
|BAROCLINIC_WAVE_DT
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,262: Line 9,319:
 
|Hydrodynamic
 
|Hydrodynamic
 
|begin_dragcoef
 
|begin_dragcoef
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,270: Line 9,330:
 
|BIHARMONIC
 
|BIHARMONIC
 
|Check if the user wants to compute the horizontal diffusion of momentum with a bi-harmonic formulation
 
|Check if the user wants to compute the horizontal diffusion of momentum with a bi-harmonic formulation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,277: Line 9,340:
 
|BIHARMONIC_COEF
 
|BIHARMONIC_COEF
 
|horizontal diffusion ocefficent used when the bi-harmonic option is on
 
|horizontal diffusion ocefficent used when the bi-harmonic option is on
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,284: Line 9,350:
 
|BOTTOMVISC_COEF
 
|BOTTOMVISC_COEF
 
|Factor that multiplies diffusion number for imposing a maximum viscosity at bottom layer  
 
|Factor that multiplies diffusion number for imposing a maximum viscosity at bottom layer  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,291: Line 9,360:
 
|BOTTOMVISC_LIM
 
|BOTTOMVISC_LIM
 
|Limitation of viscosity at the bottom due to semi-implicit discretization of shear stress on hydrodynamic equations.
 
|Limitation of viscosity at the bottom due to semi-implicit discretization of shear stress on hydrodynamic equations.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,298: Line 9,370:
 
|BOTTOMWATERFLUX
 
|BOTTOMWATERFLUX
 
|Checks if the user want to consider the effect of the soil infiltration or consolidation
 
|Checks if the user want to consider the effect of the soil infiltration or consolidation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,305: Line 9,380:
 
|BOUNDARYBAROCLINIC
 
|BOUNDARYBAROCLINIC
 
|Check if the user wants to compute the baroclinic force in the boundary faces
 
|Check if the user wants to compute the baroclinic force in the boundary faces
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,312: Line 9,390:
 
|BOUNDARYFILE
 
|BOUNDARYFILE
 
|The file name of 3D file where the relaxation coefficient are.  
 
|The file name of 3D file where the relaxation coefficient are.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,319: Line 9,400:
 
|BOXFLUXES
 
|BOXFLUXES
 
|The user can give the name of the file boxes definition. If this file exist then the model computes water fluxes between boxes
 
|The user can give the name of the file boxes definition. If this file exist then the model computes water fluxes between boxes
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,326: Line 9,410:
 
|BRCORIOLIS
 
|BRCORIOLIS
 
|Checks if the user wants to relax the coriolis force
 
|Checks if the user wants to relax the coriolis force
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,335: Line 9,422:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|Hydrodynamic
 
|Hydrodynamic
 
|BRROX
 
|BRROX
 
|Checks if the user wants to relax the baroclinic force
 
|Checks if the user wants to relax the baroclinic force
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,347: Line 9,440:
 
|BRTRANSPORT
 
|BRTRANSPORT
 
|Checks if the user wants to relax the horizontal momentum transport
 
|Checks if the user wants to relax the horizontal momentum transport
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,354: Line 9,450:
 
|BRVELOCITY
 
|BRVELOCITY
 
|Checks if the user wants to relax the horizontal velocity  
 
|Checks if the user wants to relax the horizontal velocity  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,361: Line 9,460:
 
|BRWATERLEVEL
 
|BRWATERLEVEL
 
|Checks if the user wants to relax the water level  
 
|Checks if the user wants to relax the water level  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,367: Line 9,469:
 
|Hydrodynamic
 
|Hydrodynamic
 
|CELERITY_TYPE
 
|CELERITY_TYPE
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,375: Line 9,480:
 
|CENTRIFUGAL
 
|CENTRIFUGAL
 
|Checks if the user want to consider the CENTRIFUGAL force. By default the CENTRIFUGAL force is not compute
 
|Checks if the user want to consider the CENTRIFUGAL force. By default the CENTRIFUGAL force is not compute
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,382: Line 9,490:
 
|CONSERVATIVE_HOR_DIF
 
|CONSERVATIVE_HOR_DIF
 
|Check if the user wants to compute the horizontal diffusion in a conservative way.
 
|Check if the user wants to compute the horizontal diffusion in a conservative way.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,389: Line 9,500:
 
|CONTINUOUS
 
|CONTINUOUS
 
|Checks if the user pretends to continue a old run
 
|Checks if the user pretends to continue a old run
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,396: Line 9,510:
 
|CORIOLIS
 
|CORIOLIS
 
|Checks  if the user pretends to compute the coriolis force effect
 
|Checks  if the user pretends to compute the coriolis force effect
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,403: Line 9,520:
 
|CORRECT_WATERLEVEL
 
|CORRECT_WATERLEVEL
 
|check if the user wants to corrected the water level when it is lower than a reference water level
 
|check if the user wants to corrected the water level when it is lower than a reference water level
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,412: Line 9,532:
 
|
 
|
 
|
 
|
 +
|
 +
|
 +
|Boolean
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Hydrodynamic
+
| rowspan="3" |Hydrodynamic
 
| rowspan="3" |CYCLIC_DIRECTION
 
| rowspan="3" |CYCLIC_DIRECTION
 
| rowspan="3" |Check along which direction the user wants to impose a CYCLIC boundary condition
 
| rowspan="3" |Check along which direction the user wants to impose a CYCLIC boundary condition
 
|DirectionX_
 
|DirectionX_
 
|Direction x
 
|Direction x
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|DirectionY_
 
|DirectionY_
 
|Direction Y
 
|Direction Y
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|DirectionXY_
 
|DirectionXY_
 
|Directions X and Y
 
|Directions X and Y
Line 9,436: Line 9,558:
 
|
 
|
 
|
 
|
 +
|
 +
|
 +
|Boolean
 
|-
 
|-
 
| Water
 
| Water
Line 9,441: Line 9,566:
 
|DEADZONE
 
|DEADZONE
 
|Check if the user wants to define a dead zone where the submodel do not look for information in the father model.
 
|Check if the user wants to define a dead zone where the submodel do not look for information in the father model.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,448: Line 9,576:
 
|DEADZONE_FILE
 
|DEADZONE_FILE
 
|Its a griddata file, filled with 0s and 1s indicating which cells are deadzone and which cells are not.
 
|Its a griddata file, filled with 0s and 1s indicating which cells are deadzone and which cells are not.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,454: Line 9,585:
 
|Hydrodynamic
 
|Hydrodynamic
 
|DECAY_IN
 
|DECAY_IN
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,461: Line 9,595:
 
|Hydrodynamic
 
|Hydrodynamic
 
|DECAY_OUT
 
|DECAY_OUT
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Hydrodynamic
+
| rowspan="2" |Hydrodynamic
 
| rowspan="2" |DISCRETIZATION
 
| rowspan="2" |DISCRETIZATION
 
| rowspan="2" |Check what type of implicit discretization in time is choose for the global equations
 
| rowspan="2" |Check what type of implicit discretization in time is choose for the global equations
 
|1
 
|1
 
|Abbott Scheme - 4 equations per iteration
 
|Abbott Scheme - 4 equations per iteration
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|2
 
|2
 
|Leendertse Scheme - 6 equations per iteration
 
|Leendertse Scheme - 6 equations per iteration
Line 9,480: Line 9,618:
 
|Hydrodynamic
 
|Hydrodynamic
 
|DT_OUTPUT_TIME
 
|DT_OUTPUT_TIME
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,488: Line 9,629:
 
|ENERGY
 
|ENERGY
 
|Check if the user want to compute the potential and kinetic energy of the entire domain
 
|Check if the user want to compute the potential and kinetic energy of the entire domain
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,494: Line 9,638:
 
|Hydrodynamic
 
|Hydrodynamic
 
|ENERGY_DT
 
|ENERGY_DT
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,501: Line 9,648:
 
|Hydrodynamic
 
|Hydrodynamic
 
|ENERGY_WINDOW
 
|ENERGY_WINDOW
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,509: Line 9,659:
 
|ENTERING_WAVE
 
|ENTERING_WAVE
 
|Checks if the wave imposed in the boundary is entering in the domain or leaving it
 
|Checks if the wave imposed in the boundary is entering in the domain or leaving it
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="5" |Water
|Hydrodynamic
+
| rowspan="5" |Hydrodynamic
 
| rowspan="5" |EVOLUTION
 
| rowspan="5" |EVOLUTION
 
| rowspan="5" |Checks out if the user pretends to actualize the hydrodynamic properties computing the equations or reading them from a file there is also the possibility of read the residual flow of the last run and maintain the instant properties equal to the residual ones. The user can also say that the hydrodynamic properties have always null value.
 
| rowspan="5" |Checks out if the user pretends to actualize the hydrodynamic properties computing the equations or reading them from a file there is also the possibility of read the residual flow of the last run and maintain the instant properties equal to the residual ones. The user can also say that the hydrodynamic properties have always null value.
 
|No_hydrodynamic
 
|No_hydrodynamic
 
|No hydrodynamic
 
|No hydrodynamic
 +
| rowspan="5" |
 +
| rowspan="5" |
 +
| rowspan="5" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|Read_File
 
|Read_File
 
|Read File
 
|Read File
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|Residual_hydrodynamic
 
|Residual_hydrodynamic
 
|Residual hydrodynamic
 
|Residual hydrodynamic
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|Solve_Equations
 
|Solve_Equations
 
|Solve equations
 
|Solve equations
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|Vertical1D
 
|Vertical1D
 
|1D vertical model of the water column. Only coriolis and wind stress. Neuman conditions of horizontal null gradient are imposed for velocities and water level.
 
|1D vertical model of the water column. Only coriolis and wind stress. Neuman conditions of horizontal null gradient are imposed for velocities and water level.
Line 9,543: Line 9,691:
 
|HMIN_ADVECTION
 
|HMIN_ADVECTION
 
|The user can impose a specific water column heigth below which the horizontal advection is not compute. By default when the water column has less then 0.5 m the advection in not compute
 
|The user can impose a specific water column heigth below which the horizontal advection is not compute. By default when the water column has less then 0.5 m the advection in not compute
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,550: Line 9,701:
 
|HMIN_CHEZY
 
|HMIN_CHEZY
 
|Checks the minimum water column height below which the chezy coefficient is constant. By default Hmin_Chezy is equal to 10 cm
 
|Checks the minimum water column height below which the chezy coefficient is constant. By default Hmin_Chezy is equal to 10 cm
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,556: Line 9,710:
 
|Hydrodynamic
 
|Hydrodynamic
 
|HMIN_CONVECTION
 
|HMIN_CONVECTION
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,564: Line 9,721:
 
|HORIZONTALADVECTION
 
|HORIZONTALADVECTION
 
|Checks  if the user pretends to compute the horizontal advection effect
 
|Checks  if the user pretends to compute the horizontal advection effect
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,570: Line 9,730:
 
|Hydrodynamic
 
|Hydrodynamic
 
|HORIZONTALCONVECTION
 
|HORIZONTALCONVECTION
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,578: Line 9,741:
 
|HORIZONTALDIFFUSION
 
|HORIZONTALDIFFUSION
 
|Checks  if the user pretends to compute the horizontal diffusion effect
 
|Checks  if the user pretends to compute the horizontal diffusion effect
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,585: Line 9,751:
 
|IMPLICIT_HORADVECTION
 
|IMPLICIT_HORADVECTION
 
|Checks if the user wants to compute the horizontal advection implicitly. By default the model do not compute the horizontal advection implicitly
 
|Checks if the user wants to compute the horizontal advection implicitly. By default the model do not compute the horizontal advection implicitly
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,591: Line 9,760:
 
|Hydrodynamic
 
|Hydrodynamic
 
|IMPLICIT_HORCONVECTION
 
|IMPLICIT_HORCONVECTION
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Hydrodynamic
+
| rowspan="3" |Hydrodynamic
 
| rowspan="3" |IMPLICIT_VERTADVECTION
 
| rowspan="3" |IMPLICIT_VERTADVECTION
 
| rowspan="3" |Check if the vertical advection is implicit
 
| rowspan="3" |Check if the vertical advection is implicit
 
|0.0
 
|0.0
 
|Explicit
 
|Explicit
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|0.5
 
|0.5
 
|Hybrid for option in (0.0, 1.0)
 
|Hybrid for option in (0.0, 1.0)
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|1.0
 
|1.0
 
|Implicit
 
|Implicit
Line 9,615: Line 9,786:
 
|Hydrodynamic
 
|Hydrodynamic
 
|IMPLICIT_VERTCONVECTION
 
|IMPLICIT_VERTCONVECTION
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Hydrodynamic
+
| rowspan="3" |Hydrodynamic
 
| rowspan="3" |IMPLICIT_VERTDIFFUSION
 
| rowspan="3" |IMPLICIT_VERTDIFFUSION
 
| rowspan="3" |Check if the vertical advection is implicit
 
| rowspan="3" |Check if the vertical advection is implicit
 
|0.0
 
|0.0
 
|Explicit
 
|Explicit
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|0.5
 
|0.5
 
|Hybrid for option in (0.0, 1.0)
 
|Hybrid for option in (0.0, 1.0)
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|1.0
 
|1.0
 
|Implicit
 
|Implicit
Line 9,640: Line 9,813:
 
|INERTIAL_PERIODS
 
|INERTIAL_PERIODS
 
|The period after which the total effect of the baroclinic force is compute
 
|The period after which the total effect of the baroclinic force is compute
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,647: Line 9,823:
 
|INITIAL_ELEVATION
 
|INITIAL_ELEVATION
 
|Checks if the user wants to impose a initial elevation
 
|Checks if the user wants to impose a initial elevation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,656: Line 9,835:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|Hydrodynamic
 
|Hydrodynamic
 
|INITIAL_VEL_U
 
|INITIAL_VEL_U
 
|Checks  if the user pretends to impose a initial U (X) velocity
 
|Checks  if the user pretends to impose a initial U (X) velocity
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,668: Line 9,853:
 
|INITIAL_VEL_V
 
|INITIAL_VEL_V
 
|Checks  if the user pretends to impose a initial V (Y) velocity
 
|Checks  if the user pretends to impose a initial V (Y) velocity
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,677: Line 9,865:
 
|1
 
|1
 
|Imposed water level using the inverted barometer simplified solution
 
|Imposed water level using the inverted barometer simplified solution
 +
|
 +
|
 +
|
 
|-
 
|-
 
| Water
 
| Water
Line 9,683: Line 9,874:
 
|The user can also change the reference atmospheric pressure of the inverted barometer solution via this keyword
 
|The user can also change the reference atmospheric pressure of the inverted barometer solution via this keyword
 
|101325
 
|101325
 +
|
 +
|
 +
|
 
|
 
|
 
|-
 
|-
Line 9,688: Line 9,882:
 
|Hydrodynamic
 
|Hydrodynamic
 
|INTERNAL_CELERITY
 
|INTERNAL_CELERITY
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,696: Line 9,893:
 
|LOCAL_DENSITY
 
|LOCAL_DENSITY
 
|Check if the user want to divide the baroclinic pressure by the local density to compute. if this option is false is used the reference density  
 
|Check if the user want to divide the baroclinic pressure by the local density to compute. if this option is false is used the reference density  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="7" |Water
|Hydrodynamic
+
| rowspan="7" |Hydrodynamic
 
| rowspan="7" |LOCAL_SOLUTION
 
| rowspan="7" |LOCAL_SOLUTION
 
| rowspan="7" |Check what type o local (or reference) solution the user wants to use as a reference for the radiative and relaxation boundary conditions
 
| rowspan="7" |Check what type o local (or reference) solution the user wants to use as a reference for the radiative and relaxation boundary conditions
 
|1
 
|1
 
|No local solution
 
|No local solution
 +
| rowspan="7" |
 +
| rowspan="7" |
 +
| rowspan="7" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|2
 
|2
 
|Submodel
 
|Submodel
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|3
 
|3
 
|AssimilationField
 
|AssimilationField
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|4
 
|4
 
|Gauge
 
|Gauge
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|5
 
|5
 
|AssimilaPlusSubModel
 
|AssimilaPlusSubModel
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|6
 
|6
 
|GaugePlusSubModel
 
|GaugePlusSubModel
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|7
 
|7
 
|AssimilaGaugeSubModel
 
|AssimilaGaugeSubModel
Line 9,740: Line 9,931:
 
|MIN_COMPONENT
 
|MIN_COMPONENT
 
|The minimum component of the radiative wave below which the radiation process is canceled
 
|The minimum component of the radiative wave below which the radiation process is canceled
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,747: Line 9,941:
 
|MIN_VELOCITY
 
|MIN_VELOCITY
 
|The minimum velocity in the open boundary below which the radiation is canceled  
 
|The minimum velocity in the open boundary below which the radiation is canceled  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,754: Line 9,951:
 
|MIN_WATERLEVEL
 
|MIN_WATERLEVEL
 
|reference level below which the water level is corrected.
 
|reference level below which the water level is corrected.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,760: Line 9,960:
 
|Hydrodynamic
 
|Hydrodynamic
 
|MINVEL_BAROCLINIC
 
|MINVEL_BAROCLINIC
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,768: Line 9,971:
 
|MISSING_NULL
 
|MISSING_NULL
 
|Check if the user wants to replace the missing values by zero
 
|Check if the user wants to replace the missing values by zero
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,775: Line 9,981:
 
|MOMENTUM_DISCHARGE
 
|MOMENTUM_DISCHARGE
 
|Checks if the user wants to do a discharge of momentum. By default the model do not have momentum discharges
 
|Checks if the user wants to do a discharge of momentum. By default the model do not have momentum discharges
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,781: Line 9,990:
 
|Hydrodynamic
 
|Hydrodynamic
 
|NH_ALPHA_LU
 
|NH_ALPHA_LU
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,788: Line 10,000:
 
|Hydrodynamic
 
|Hydrodynamic
 
|NH_IMPLICIT_COEF_W
 
|NH_IMPLICIT_COEF_W
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,795: Line 10,010:
 
|Hydrodynamic
 
|Hydrodynamic
 
|NH_MAXIT
 
|NH_MAXIT
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,802: Line 10,020:
 
|Hydrodynamic
 
|Hydrodynamic
 
|NH_NORMALIZED_RESIDUAL
 
|NH_NORMALIZED_RESIDUAL
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,809: Line 10,030:
 
|Hydrodynamic
 
|Hydrodynamic
 
|NH_RESIDUAL
 
|NH_RESIDUAL
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,817: Line 10,041:
 
|NONHYDROSTATIC
 
|NONHYDROSTATIC
 
|Checks if the user want to compute the effect of local vertical acceleration over the pressure field
 
|Checks if the user want to compute the effect of local vertical acceleration over the pressure field
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,823: Line 10,050:
 
|Hydrodynamic
 
|Hydrodynamic
 
|NORMAL_BAROCLINIC
 
|NORMAL_BAROCLINIC
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,831: Line 10,061:
 
|NULL_BOUND_HORADV
 
|NULL_BOUND_HORADV
 
|Checks if the user wants to assume null horizontal advection in the open boundary
 
|Checks if the user wants to assume null horizontal advection in the open boundary
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,837: Line 10,070:
 
|Hydrodynamic
 
|Hydrodynamic
 
|NULL_BOUND_HORCONV
 
|NULL_BOUND_HORCONV
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,846: Line 10,082:
 
|Checks if the user want to parameterize the influence of an
 
|Checks if the user want to parameterize the influence of an
 
OBSTACLE in the flow, giving a determined drag coefficient
 
OBSTACLE in the flow, giving a determined drag coefficient
 
+
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,854: Line 10,092:
 
|OUTPUT_FACES
 
|OUTPUT_FACES
 
|Option to output to Hydrodynamic HDF5 file the horizontal velocity component properties in the velocity (U or V) grid.  
 
|Option to output to Hydrodynamic HDF5 file the horizontal velocity component properties in the velocity (U or V) grid.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,861: Line 10,102:
 
|OUTPUT_PROFILE
 
|OUTPUT_PROFILE
 
|Perform profile outputs in HDF5 format
 
|Perform profile outputs in HDF5 format
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,867: Line 10,111:
 
|Hydrodynamic
 
|Hydrodynamic
 
|OUTPUT_TIME
 
|OUTPUT_TIME
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,874: Line 10,121:
 
|Hydrodynamic
 
|Hydrodynamic
 
|POTENTIAL_ALGORITHM
 
|POTENTIAL_ALGORITHM
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="4" |Water
|Hydrodynamic
+
| rowspan="4" |Hydrodynamic
 
| rowspan="4" |RADIATION
 
| rowspan="4" |RADIATION
 
| rowspan="4" |Checks if the user wants to impose the Flather 1974 radiation boundary condition or other
 
| rowspan="4" |Checks if the user wants to impose the Flather 1974 radiation boundary condition or other
 
|0
 
|0
 
|No Radiation
 
|No Radiation
 +
| rowspan="4" |
 +
| rowspan="4" |
 +
| rowspan="4" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|1
 
|1
 
|FlatherWindWave_
 
|FlatherWindWave_
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|2
 
|2
 
|FlatherLocalSolution_
 
|FlatherLocalSolution_
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|3
 
|3
 
|BlumbergKantha_
 
|BlumbergKantha_
Line 9,904: Line 10,151:
 
|RAMP
 
|RAMP
 
|Check if the user wants to start with baroclinic force null and only after a specific period the total force is compute.
 
|Check if the user wants to start with baroclinic force null and only after a specific period the total force is compute.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,911: Line 10,161:
 
|RAMP_START
 
|RAMP_START
 
|This keyword is used to read the initial data Year Month Day Hour Minutes Seconds
 
|This keyword is used to read the initial data Year Month Day Hour Minutes Seconds
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,918: Line 10,171:
 
|RECORDING
 
|RECORDING
 
|Checks if the user wants to record the hydrodynamic properties in binary format that can be used latter by the option Read_File of the keyword EVOLUTION. By default the model do not record the flow properties
 
|Checks if the user wants to record the hydrodynamic properties in binary format that can be used latter by the option Read_File of the keyword EVOLUTION. By default the model do not record the flow properties
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,924: Line 10,180:
 
|Hydrodynamic
 
|Hydrodynamic
 
|REF_BOUND_WATERLEVEL
 
|REF_BOUND_WATERLEVEL
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,931: Line 10,190:
 
|Hydrodynamic
 
|Hydrodynamic
 
|RELAX_REF_VEL
 
|RELAX_REF_VEL
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,939: Line 10,201:
 
|RESIDUAL
 
|RESIDUAL
 
|Check if the user want to compute the residual flow  
 
|Check if the user want to compute the residual flow  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,946: Line 10,211:
 
|RESTART_FILE_OUTPUT_TIME
 
|RESTART_FILE_OUTPUT_TIME
 
|Output Time to write restart files
 
|Output Time to write restart files
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,953: Line 10,221:
 
|RESTART_FILE_OVERWRITE
 
|RESTART_FILE_OVERWRITE
 
|Defines whether to overwrite the output restart file or not. By default, the output restart is not overwritten
 
|Defines whether to overwrite the output restart file or not. By default, the output restart is not overwritten
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,960: Line 10,231:
 
|SLIPPING_CONDITION
 
|SLIPPING_CONDITION
 
|Checks if the user want to consider the slipping condition for horizontal diffusion
 
|Checks if the user want to consider the slipping condition for horizontal diffusion
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,968: Line 10,242:
 
|Imposed a specific period in seconds after which the model consider the total imposed boundary wave. Along this period the wave amplitude is multiplied by a coefficient that has linear evolution between 0 and 1.
 
|Imposed a specific period in seconds after which the model consider the total imposed boundary wave. Along this period the wave amplitude is multiplied by a coefficient that has linear evolution between 0 and 1.
 
By default this period is zero seconds
 
By default this period is zero seconds
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,975: Line 10,252:
 
|STATISTICS
 
|STATISTICS
 
|Checks out if the user pretends the statistics of the hydrodynamic properties
 
|Checks out if the user pretends the statistics of the hydrodynamic properties
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,982: Line 10,262:
 
|STATISTICS_FILE
 
|STATISTICS_FILE
 
|The statistics definition file of the hydrodynamic properties
 
|The statistics definition file of the hydrodynamic properties
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,989: Line 10,272:
 
|SUBMODEL
 
|SUBMODEL
 
|Check if the user wants to run this model as a submodel
 
|Check if the user wants to run this model as a submodel
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 9,998: Line 10,284:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|Hydrodynamic
 
|Hydrodynamic
 
|TIDE
 
|TIDE
 
|Checks if the user pretends to impose a wave tide in the open boundary
 
|Checks if the user pretends to impose a wave tide in the open boundary
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,010: Line 10,302:
 
|TIDEPOTENTIAL
 
|TIDEPOTENTIAL
 
|Checks if the user want to consider the effect of the potential tide
 
|Checks if the user want to consider the effect of the potential tide
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,017: Line 10,312:
 
|TIME_SERIE
 
|TIME_SERIE
 
|Checks out if the user pretends to write a time serie
 
|Checks out if the user pretends to write a time serie
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,023: Line 10,321:
 
|Hydrodynamic
 
|Hydrodynamic
 
|TIME_SERIE_LOCATION
 
|TIME_SERIE_LOCATION
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,031: Line 10,332:
 
|TLAG_FILE
 
|TLAG_FILE
 
|The name file where are the relaxation times defined for the radiation boundary condition  
 
|The name file where are the relaxation times defined for the radiation boundary condition  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,037: Line 10,341:
 
|Hydrodynamic
 
|Hydrodynamic
 
|TVD_METHOD_H
 
|TVD_METHOD_H
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,044: Line 10,351:
 
|Hydrodynamic
 
|Hydrodynamic
 
|TVD_METHOD_V
 
|TVD_METHOD_V
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Hydrodynamic
+
| rowspan="3" |Hydrodynamic
 
| rowspan="3" |UP_CENTER
 
| rowspan="3" |UP_CENTER
 
| rowspan="3" |Check if the horizontal advection discretization is upstream or center differences. By default advection is computed using a Upstream scheme
 
| rowspan="3" |Check if the horizontal advection discretization is upstream or center differences. By default advection is computed using a Upstream scheme
 
|0.0
 
|0.0
 
|Centred differences
 
|Centred differences
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|0.5
 
|0.5
 
|Hybrid for option in (0,1)
 
|Hybrid for option in (0,1)
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|1.0
 
|1.0
 
|Upstream
 
|Upstream
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Hydrodynamic
+
| rowspan="2" |Hydrodynamic
 
| rowspan="2" |VELNORMALBOUNDARY
 
| rowspan="2" |VELNORMALBOUNDARY
 
| rowspan="2" |Checks the velocities the user want to impose in the exterior faces
 
| rowspan="2" |Checks the velocities the user want to impose in the exterior faces
 
|1
 
|1
 
|null value
 
|null value
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|2
 
|2
 
|null gradient
 
|null gradient
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Hydrodynamic
+
| rowspan="2" |Hydrodynamic
 
| rowspan="2" |VELTANGENTIALBOUNDARY
 
| rowspan="2" |VELTANGENTIALBOUNDARY
 
| rowspan="2" |Checks the velocities the user want to impose between two boundary points
 
| rowspan="2" |Checks the velocities the user want to impose between two boundary points
 
|1
 
|1
 
|null value
 
|null value
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|2
 
|2
 
|null gradient
 
|null gradient
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Hydrodynamic
+
| rowspan="3" |Hydrodynamic
|VERTICAL_AXISYMMETRIC
+
| rowspan="3" |VERTICAL_AXISYMMETRIC
|Checks if the user wants to simulate implicit the sea level evolution (by default is ADI). This option only works if the flow has only one horizontal dimension. (0 - ADI; 1 - X always implicit; 2 - Y always implicit)
+
| rowspan="3" |Checks if the user wants to simulate implicit the sea level evolution. This option only works if the flow has only one horizontal dimension.  
|
+
|0
|
+
|ADI
 +
| rowspan="3" |0
 +
| rowspan="3" |
 +
| rowspan="3" |INTEGER
 +
|-
 +
|1
 +
|X always implicit
 +
|-
 +
|2
 +
|Y always implicit
 
|-
 
|-
 
| Water
 
| Water
Line 10,100: Line 10,420:
 
|VERTICALADVECTION
 
|VERTICALADVECTION
 
|Checks  if the user pretends to compute the vertical advection effect
 
|Checks  if the user pretends to compute the vertical advection effect
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,106: Line 10,429:
 
|Hydrodynamic
 
|Hydrodynamic
 
|VERTICALCONVECTION
 
|VERTICALCONVECTION
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,114: Line 10,440:
 
|VERTICALDIFFUSION
 
|VERTICALDIFFUSION
 
|Checks  if the user pretends to compute the vertical diffusion effect
 
|Checks  if the user pretends to compute the vertical diffusion effect
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,121: Line 10,450:
 
|VMIN_CHEZY
 
|VMIN_CHEZY
 
|Checks the minimum velocity (Vmin_Chezy) below which the chezy coefficient is constant if the water column is smaller than Hmin_Chezy. By default Vmin_Chezy is equal to 0.10 m/s
 
|Checks the minimum velocity (Vmin_Chezy) below which the chezy coefficient is constant if the water column is smaller than Hmin_Chezy. By default Vmin_Chezy is equal to 0.10 m/s
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,127: Line 10,459:
 
|Hydrodynamic
 
|Hydrodynamic
 
|VOLUME_RELATION_MAX
 
|VOLUME_RELATION_MAX
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,137: Line 10,472:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|Hydrodynamic
 
|Hydrodynamic
 
|WATER_DISCHARGES
 
|WATER_DISCHARGES
 
|Check if the user want to water discharges
 
|Check if the user want to water discharges
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,149: Line 10,490:
 
|WATERCOLUMN2D
 
|WATERCOLUMN2D
 
|water column thickness below which the 3D processes are disconnected  
 
|water column thickness below which the 3D processes are disconnected  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,156: Line 10,500:
 
|WATERLEVEL_MAX_MIN
 
|WATERLEVEL_MAX_MIN
 
|Computes the spatial maps of the maximum and of the minimum water elevation.
 
|Computes the spatial maps of the maximum and of the minimum water elevation.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,163: Line 10,510:
 
|WAVE_DIRECTION
 
|WAVE_DIRECTION
 
|The user with this keyword give a direction to a wave entering the domain
 
|The user with this keyword give a direction to a wave entering the domain
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,170: Line 10,520:
 
|WAVE_STRESS
 
|WAVE_STRESS
 
|Checks if the user want to consider the effect of the waves stress. By default the waves stress is not compute
 
|Checks if the user want to consider the effect of the waves stress. By default the waves stress is not compute
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Hydrodynamic
+
| rowspan="3" |Hydrodynamic
 
| rowspan="3" |WIND
 
| rowspan="3" |WIND
 
| rowspan="3" |Checks if the user want to consider the effect of the wind stress. By default the wind stress is not computed
 
| rowspan="3" |Checks if the user want to consider the effect of the wind stress. By default the wind stress is not computed
 
|0
 
|0
 
|No wind forcing
 
|No wind forcing
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|1
 
|1
 
|wind forcing
 
|wind forcing
 
|-
 
|-
| Water
 
|Hydrodynamic
 
 
|2
 
|2
 
|wind forcing with a smooth start
 
|wind forcing with a smooth start
Line 10,215: Line 10,567:
 
! scope="col" |Type
 
! scope="col" |Type
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|HydrodynamicFile
+
| rowspan="2" |HydrodynamicFile
 
| rowspan="2" |BAT_INTEGRATION_TYPE
 
| rowspan="2" |BAT_INTEGRATION_TYPE
 
| rowspan="2" |It is possible to calculate the new bathymetry (spacial integration) using two different options
 
| rowspan="2" |It is possible to calculate the new bathymetry (spacial integration) using two different options
 
|MaxVal_Type
 
|MaxVal_Type
 
|Each new integrated cell has the maximum value of the cells used to do the integration of that cell
 
|Each new integrated cell has the maximum value of the cells used to do the integration of that cell
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|HydrodynamicFile
 
 
|MeanVal_Type
 
|MeanVal_Type
 
|The depth of the integrated cell is obtained by the average of the cells used to do the integration of that cell.
 
|The depth of the integrated cell is obtained by the average of the cells used to do the integration of that cell.
Line 10,231: Line 10,584:
 
|DT_HYDROFILE
 
|DT_HYDROFILE
 
|Time Step of the hydrodynamic file
 
|Time Step of the hydrodynamic file
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,238: Line 10,594:
 
|IN_FIELD
 
|IN_FIELD
 
|Input File Name
 
|Input File Name
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,246: Line 10,605:
 
| rowspan="2" |Input File Type
 
| rowspan="2" |Input File Type
 
|BeginEnd_type
 
|BeginEnd_type
 +
|
 +
|
 +
|
 
|
 
|
 
|-
 
|-
Line 10,251: Line 10,613:
 
|HydrodynamicFile
 
|HydrodynamicFile
 
|M2_Tide_type
 
|M2_Tide_type
 +
|
 +
|
 +
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|HydrodynamicFile
+
| rowspan="2" |HydrodynamicFile
 
| rowspan="2" |IN_FILE_VERSION
 
| rowspan="2" |IN_FILE_VERSION
 
| rowspan="2" |Input File Version
 
| rowspan="2" |Input File Version
 
|1
 
|1
 
|Only available if LOAD_TO_MEMORY = 0
 
|Only available if LOAD_TO_MEMORY = 0
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|HydrodynamicFile
 
 
|2
 
|2
 
|
 
|
Line 10,269: Line 10,635:
 
|LOAD_TO_MEMORY
 
|LOAD_TO_MEMORY
 
|Load all information to memory
 
|Load all information to memory
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,276: Line 10,645:
 
|N_ITEGRATION_CELLS
 
|N_ITEGRATION_CELLS
 
|Number of cells that will be integrated (the integration space step)
 
|Number of cells that will be integrated (the integration space step)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,283: Line 10,655:
 
|NEW_BATIM
 
|NEW_BATIM
 
|Gets the name of the new bathymetry
 
|Gets the name of the new bathymetry
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,290: Line 10,665:
 
|OUT_FIELD
 
|OUT_FIELD
 
|Ouput Data File
 
|Ouput Data File
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|HydrodynamicFile
+
| rowspan="2" |HydrodynamicFile
 
| rowspan="2" |OUT_FILE_VERSION
 
| rowspan="2" |OUT_FILE_VERSION
 
| rowspan="2" |Controls the version of the output file
 
| rowspan="2" |Controls the version of the output file
 
|1
 
|1
 
|
 
|
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|HydrodynamicFile
 
 
|2
 
|2
 
|
 
|
Line 10,311: Line 10,690:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|HydrodynamicFile
 
|HydrodynamicFile
 
|TIME_INTEGRATION
 
|TIME_INTEGRATION
 
|Performs an integration in time,  
 
|Performs an integration in time,  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,346: Line 10,731:
 
| Water
 
| Water
 
|InterfaceSedimentWater
 
|InterfaceSedimentWater
|begin_diff_coef
+
|BEGIN_DIFF_COEF
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,355: Line 10,743:
 
|BENTHOS
 
|BENTHOS
 
|Compute property benthic ecological processes  
 
|Compute property benthic ecological processes  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,362: Line 10,753:
 
|BOX_TIME_SERIE
 
|BOX_TIME_SERIE
 
|Outputs property results in box time series
 
|Outputs property results in box time series
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,369: Line 10,763:
 
|BOXFLUXES
 
|BOXFLUXES
 
|Path to boxes file. If specified in input data file, computes box integration based on the defined file.
 
|Path to boxes file. If specified in input data file, computes box integration based on the defined file.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,376: Line 10,773:
 
|CEQUALW2
 
|CEQUALW2
 
|Compute property CEQUALW2 benthic ecological processes
 
|Compute property CEQUALW2 benthic ecological processes
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,383: Line 10,783:
 
|CONSOLIDATION
 
|CONSOLIDATION
 
|Activates consolidation processes as well as erosion from consolidated sediment compartment
 
|Activates consolidation processes as well as erosion from consolidated sediment compartment
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,390: Line 10,793:
 
|DEPOSITION
 
|DEPOSITION
 
|Compute property deposition
 
|Compute property deposition
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,397: Line 10,803:
 
|DESCRIPTION
 
|DESCRIPTION
 
|Brief description of the property
 
|Brief description of the property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,404: Line 10,813:
 
|DESCRIPTION
 
|DESCRIPTION
 
|Description of the rate to perform output
 
|Description of the rate to perform output
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,411: Line 10,823:
 
|DETRITUS
 
|DETRITUS
 
|Compute property as detritus
 
|Compute property as detritus
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,418: Line 10,833:
 
|EROSION
 
|EROSION
 
|Compute property erosion
 
|Compute property erosion
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,425: Line 10,843:
 
|FIRSTPROP
 
|FIRSTPROP
 
|Name of the first property involved in the rate
 
|Name of the first property involved in the rate
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,432: Line 10,853:
 
|MASS_LIMITATION
 
|MASS_LIMITATION
 
|Property mass is finite
 
|Property mass is finite
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,439: Line 10,863:
 
|MASS_MIN
 
|MASS_MIN
 
|Minimum mass allowed for the property if MASS_LIMITATION is on. Values of zero are allowed.
 
|Minimum mass allowed for the property if MASS_LIMITATION is on. Values of zero are allowed.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,446: Line 10,873:
 
|NAME
 
|NAME
 
|Name of the property
 
|Name of the property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,453: Line 10,883:
 
|NAME
 
|NAME
 
|Name of the rate to perform output
 
|Name of the rate to perform output
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,460: Line 10,893:
 
|OLD
 
|OLD
 
|Initialization is made based on previous run (overrides FillMatrix keywords)
 
|Initialization is made based on previous run (overrides FillMatrix keywords)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,467: Line 10,903:
 
|OUTPUT_HDF
 
|OUTPUT_HDF
 
|Outputs property results in HDF5 format
 
|Outputs property results in HDF5 format
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,474: Line 10,913:
 
|OUTPUT_SHEAR_STRESS
 
|OUTPUT_SHEAR_STRESS
 
|Output shear stress in HDF format
 
|Output shear stress in HDF format
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,481: Line 10,923:
 
|OUTPUT_TIME
 
|OUTPUT_TIME
 
|Vector with instants (starting from 0) when to perform outputs. The last number in the vector is the time step to perform the remaining outputs.  
 
|Vector with instants (starting from 0) when to perform outputs. The last number in the vector is the time step to perform the remaining outputs.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,488: Line 10,933:
 
|PARTICULATE
 
|PARTICULATE
 
|Property physical state: 0 - Dissolved; 1 - Particulate
 
|Property physical state: 0 - Dissolved; 1 - Particulate
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,495: Line 10,943:
 
|REFERENCE_DEPTH
 
|REFERENCE_DEPTH
 
|Reference depth below which shear stress is limited. Keyword is only read if SHEAR_STRESS_LIMITATION is on.
 
|Reference depth below which shear stress is limited. Keyword is only read if SHEAR_STRESS_LIMITATION is on.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,504: Line 10,955:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|InterfaceSedimentWater
 
|InterfaceSedimentWater
 
|RESTART_FILE_OUTPUT_TIME
 
|RESTART_FILE_OUTPUT_TIME
 
|Output Time to write restart files
 
|Output Time to write restart files
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,516: Line 10,973:
 
|RESTART_FILE_OVERWRITE
 
|RESTART_FILE_OVERWRITE
 
|Defines whether to overwrite the output restart file or not. By default, the output restart is not overwritten
 
|Defines whether to overwrite the output restart file or not. By default, the output restart is not overwritten
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,523: Line 10,983:
 
|SAND_TRANSPORT
 
|SAND_TRANSPORT
 
|Compute sand tranport
 
|Compute sand tranport
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,530: Line 10,993:
 
|SECONDPROP
 
|SECONDPROP
 
|Name of the second property involved in the rate
 
|Name of the second property involved in the rate
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,537: Line 11,003:
 
|SEDIMENT_FLUXES
 
|SEDIMENT_FLUXES
 
|Compute property fluxes between interface sediment-water and sediment column
 
|Compute property fluxes between interface sediment-water and sediment column
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,544: Line 11,013:
 
|SEDIMENT_WATER_FLUXES
 
|SEDIMENT_WATER_FLUXES
 
|Compute property fluxes between sediment and water column
 
|Compute property fluxes between sediment and water column
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,551: Line 11,023:
 
|SHEAR_STRESS_LIMITATION
 
|SHEAR_STRESS_LIMITATION
 
|Limit shear stress values in shallow zones
 
|Limit shear stress values in shallow zones
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,558: Line 11,033:
 
|STATISTICS_SHEAR
 
|STATISTICS_SHEAR
 
|Perform statistics to shear velocity
 
|Perform statistics to shear velocity
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,565: Line 11,043:
 
|STATISTICS_SHEAR_FILE
 
|STATISTICS_SHEAR_FILE
 
|Path to statistics input data file. Only read if STATISTICS_SHEAR is on.
 
|Path to statistics input data file. Only read if STATISTICS_SHEAR is on.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,572: Line 11,053:
 
|TIME_SERIE
 
|TIME_SERIE
 
|Outputs property results in time series
 
|Outputs property results in time series
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,579: Line 11,063:
 
|TIME_SERIE_LOCATION
 
|TIME_SERIE_LOCATION
 
|Path to time serie locations file
 
|Path to time serie locations file
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,586: Line 11,073:
 
|UNITS
 
|UNITS
 
|Property units
 
|Property units
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,593: Line 11,083:
 
|WATER_FLUXES
 
|WATER_FLUXES
 
|Compute property fluxes to/from water column
 
|Compute property fluxes to/from water column
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,625: Line 11,118:
 
|BOTTOM_SALINITY
 
|BOTTOM_SALINITY
 
|ambient bottom salinity when a LINEAR water column is admitted
 
|ambient bottom salinity when a LINEAR water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,632: Line 11,128:
 
|BOTTOM_TEMPERATURE
 
|BOTTOM_TEMPERATURE
 
|ambient bottom temperature when a LINEAR water column is admitted
 
|ambient bottom temperature when a LINEAR water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,639: Line 11,138:
 
|BOTTOM_VELU
 
|BOTTOM_VELU
 
|ambient bottom velocity U when a LINEAR water column is admitted
 
|ambient bottom velocity U when a LINEAR water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,646: Line 11,148:
 
|BOTTOM_VELV
 
|BOTTOM_VELV
 
|ambient bottom velocity V when a LINEAR water column is admitted
 
|ambient bottom velocity V when a LINEAR water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,653: Line 11,158:
 
|DEFAULT_SALINITY
 
|DEFAULT_SALINITY
 
|ambient salinity when a UNIFORM water column is admitted
 
|ambient salinity when a UNIFORM water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,660: Line 11,168:
 
|DEFAULT_TEMPERATURE
 
|DEFAULT_TEMPERATURE
 
|ambient temperature when a UNIFORM water column is admitted
 
|ambient temperature when a UNIFORM water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,667: Line 11,178:
 
|DEFAULT_VELU
 
|DEFAULT_VELU
 
|ambient velocity U when a UNIFORM water column is admitted
 
|ambient velocity U when a UNIFORM water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,674: Line 11,188:
 
|DEFAULT_VELV
 
|DEFAULT_VELV
 
|ambient velocity V when a UNIFORM water column is admitted
 
|ambient velocity V when a UNIFORM water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,681: Line 11,198:
 
|DT_OUTPUT
 
|DT_OUTPUT
 
|Time interval between outputs
 
|Time interval between outputs
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,688: Line 11,208:
 
|INITIAL_TRACER_CONCENTRATION
 
|INITIAL_TRACER_CONCENTRATION
 
|Initial concentration of generic tracer
 
|Initial concentration of generic tracer
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,697: Line 11,220:
 
|
 
|
 
|
 
|
|-
+
|
| Water
+
|
|Jet
+
|
 +
|-
 +
| rowspan="3" |Water
 +
| rowspan="3" |Jet
 
| rowspan="3" |LOCAL_TYPE
 
| rowspan="3" |LOCAL_TYPE
 
| rowspan="3" |Methodology to define the ambient variables
 
| rowspan="3" |Methodology to define the ambient variables
 
|FIELD3D
 
|FIELD3D
 
|3D field generated by the MOHID system
 
|3D field generated by the MOHID system
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Jet
 
 
|LINEAR
 
|LINEAR
 
|Water column where the density and velocity have a linear profile
 
|Water column where the density and velocity have a linear profile
 
|-
 
|-
| Water
 
|Jet
 
 
|UNIFORM  
 
|UNIFORM  
 
|Uniform water column
 
|Uniform water column
Line 10,719: Line 11,244:
 
|MAX_DT
 
|MAX_DT
 
|Maximum time step interval
 
|Maximum time step interval
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,726: Line 11,254:
 
|MAX_DV
 
|MAX_DV
 
|Maximum volume variation between time steps
 
|Maximum volume variation between time steps
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,733: Line 11,264:
 
|MAX_PLUME_DIAMETER
 
|MAX_PLUME_DIAMETER
 
|Plume diameter from which initial dilution stops. This value is used to simulate the jets overlapping
 
|Plume diameter from which initial dilution stops. This value is used to simulate the jets overlapping
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,740: Line 11,274:
 
|OUTFALL_ANGLE
 
|OUTFALL_ANGLE
 
|Outfall angle
 
|Outfall angle
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,747: Line 11,284:
 
|OUTFALL_LENGTH
 
|OUTFALL_LENGTH
 
|Outfall length
 
|Outfall length
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,754: Line 11,294:
 
|OUTPUT_TYPE
 
|OUTPUT_TYPE
 
|The output can be made given the exact information in specific output times or a cloud of particles for each output time
 
|The output can be made given the exact information in specific output times or a cloud of particles for each output time
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Jet
+
| rowspan="2" |Jet
 
| rowspan="2" |PARAMETERIZATION
 
| rowspan="2" |PARAMETERIZATION
 
| rowspan="2" |Parametrization used to simulate the entrainment process
 
| rowspan="2" |Parametrization used to simulate the entrainment process
 
|CORJET
 
|CORJET
 
|Parameterization based on CORJET model
 
|Parameterization based on CORJET model
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Jet
 
 
|JETLAG
 
|JETLAG
 
|Parameterization based on JETLAG model
 
|Parameterization based on JETLAG model
Line 10,773: Line 11,317:
 
|PARTICLES_NUMBER
 
|PARTICLES_NUMBER
 
|In case of OUTPUT_TYPE = CLOUD this is the number of output tracer per output time interval
 
|In case of OUTPUT_TYPE = CLOUD this is the number of output tracer per output time interval
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,780: Line 11,327:
 
|PORT_ANGLE_HZ
 
|PORT_ANGLE_HZ
 
|Port vertical angle
 
|Port vertical angle
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,787: Line 11,337:
 
|PORT_ANGLE_XY
 
|PORT_ANGLE_XY
 
|Port horizontal angle
 
|Port horizontal angle
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,794: Line 11,347:
 
|PORT_BOTTOM_DISTANCE
 
|PORT_BOTTOM_DISTANCE
 
|Port distance from the bottom
 
|Port distance from the bottom
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,801: Line 11,357:
 
|PORT_DIAMETER
 
|PORT_DIAMETER
 
|Diameter of each port
 
|Diameter of each port
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,808: Line 11,367:
 
|PORTS_NUMBER
 
|PORTS_NUMBER
 
|Number of Ports
 
|Number of Ports
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,815: Line 11,377:
 
|RUN_MAX_PERIOD
 
|RUN_MAX_PERIOD
 
|Maximum run period
 
|Maximum run period
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,822: Line 11,387:
 
|RUN_MIN_PERIOD
 
|RUN_MIN_PERIOD
 
|Minimum run period
 
|Minimum run period
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,828: Line 11,396:
 
|Jet
 
|Jet
 
|SEDIMENT_COLUMN
 
|SEDIMENT_COLUMN
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,836: Line 11,407:
 
|SURFACE_SALINITY
 
|SURFACE_SALINITY
 
|ambient surface salinity when a LINEAR water column is admitted
 
|ambient surface salinity when a LINEAR water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,843: Line 11,417:
 
|SURFACE_TEMPERATURE
 
|SURFACE_TEMPERATURE
 
|ambient surface temperature when a LINEAR water column is admitted
 
|ambient surface temperature when a LINEAR water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,850: Line 11,427:
 
|SURFACE_VELU
 
|SURFACE_VELU
 
|ambient surface velocity U when a LINEAR water column is admitted
 
|ambient surface velocity U when a LINEAR water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,857: Line 11,437:
 
|SURFACE_VELV
 
|SURFACE_VELV
 
|ambient surface velocity V when a LINEAR water column is admitted
 
|ambient surface velocity V when a LINEAR water column is admitted
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,888: Line 11,471:
 
! scope="col" |Type
 
! scope="col" |Type
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
 
| rowspan="2" |ACCIDENT_METHOD
 
| rowspan="2" |ACCIDENT_METHOD
 
| rowspan="2" |How to distribute initially the particles if the emission type is accident
 
| rowspan="2" |How to distribute initially the particles if the emission type is accident
 
|1
 
|1
 
|The "Fay" option
 
|The "Fay" option
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|2
 
|2
 
|The "Thickness" option
 
|The "Thickness" option
Line 10,905: Line 11,489:
 
|Time when the accident occur.  
 
|Time when the accident occur.  
 
By default is equal to the model start time
 
By default is equal to the model start time
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,912: Line 11,499:
 
|ADVECTION
 
|ADVECTION
 
|Move Particle due to horizontal velocity.
 
|Move Particle due to horizontal velocity.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,919: Line 11,509:
 
|AMBIENT_CONC
 
|AMBIENT_CONC
 
|Ambient concentration.
 
|Ambient concentration.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,926: Line 11,519:
 
|ASSOCIATE_BEACH_PROB
 
|ASSOCIATE_BEACH_PROB
 
|Checks if the user want to associate beaching probability to the particles
 
|Checks if the user want to associate beaching probability to the particles
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,932: Line 11,528:
 
|Lagrangian
 
|Lagrangian
 
|BEACHING
 
|BEACHING
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,940: Line 11,539:
 
|BEACHING_BOX_FILENAME
 
|BEACHING_BOX_FILENAME
 
|Link to the data file which contains the definition of the boxes used for defining the beaching probability.
 
|Link to the data file which contains the definition of the boxes used for defining the beaching probability.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,947: Line 11,549:
 
|BEACHING_LIMIT
 
|BEACHING_LIMIT
 
|Maximum distance between particles and coast for particle beaching  
 
|Maximum distance between particles and coast for particle beaching  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,954: Line 11,559:
 
|BOTTOM_DISTANCE
 
|BOTTOM_DISTANCE
 
|Distance from bottom below which the tracer can sediment.
 
|Distance from bottom below which the tracer can sediment.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,961: Line 11,569:
 
|BOTTOM_EMISSION
 
|BOTTOM_EMISSION
 
|Checks if the tracers are emited from the bottom.
 
|Checks if the tracers are emited from the bottom.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,968: Line 11,579:
 
|BOX_NUMBER
 
|BOX_NUMBER
 
|Number of box to associate to origin.
 
|Number of box to associate to origin.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,975: Line 11,589:
 
|BOXES_BEACHING_PROB
 
|BOXES_BEACHING_PROB
 
|List of Inbox Beaching Probability.
 
|List of Inbox Beaching Probability.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,982: Line 11,599:
 
|BOXVOLINIC
 
|BOXVOLINIC
 
|Initial Volume of a particle in the box.
 
|Initial Volume of a particle in the box.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,989: Line 11,609:
 
|COEF_INITIAL_MIXING
 
|COEF_INITIAL_MIXING
 
|Coefficient use to control volume increase due to initial mixing
 
|Coefficient use to control volume increase due to initial mixing
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 10,996: Line 11,619:
 
|COMPUTE_AGE
 
|COMPUTE_AGE
 
|This logical option allows to compute the age of each tracer.
 
|This logical option allows to compute the age of each tracer.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,003: Line 11,629:
 
|COMPUTE_BUOYANCY
 
|COMPUTE_BUOYANCY
 
|Computes Particle vertical velocity evolution due to density gradients
 
|Computes Particle vertical velocity evolution due to density gradients
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,010: Line 11,639:
 
|COMPUTE_PLUME
 
|COMPUTE_PLUME
 
|Computes Particle Plume due density gradients
 
|Computes Particle Plume due density gradients
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,017: Line 11,649:
 
|CONC_COLUMN
 
|CONC_COLUMN
 
|Column of the time serie input where is defined a variable concentration.
 
|Column of the time serie input where is defined a variable concentration.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,024: Line 11,659:
 
|CONC_VARIABLE
 
|CONC_VARIABLE
 
|Check if the user wants a variable concentration.
 
|Check if the user wants a variable concentration.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,031: Line 11,669:
 
|CONCENTRATION
 
|CONCENTRATION
 
|Concentration of the property.
 
|Concentration of the property.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,037: Line 11,678:
 
|Lagrangian
 
|Lagrangian
 
|D50
 
|D50
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,045: Line 11,689:
 
|DEFAULT_BEACHING_PROB
 
|DEFAULT_BEACHING_PROB
 
|The probability a particle "beaches" when beaching is enabled
 
|The probability a particle "beaches" when beaching is enabled
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Lagrangian
+
| rowspan="3" |Lagrangian
 
| rowspan="3" |DENSITY_METHOD
 
| rowspan="3" |DENSITY_METHOD
 
| rowspan="3" |Formula to calculate particle density
 
| rowspan="3" |Formula to calculate particle density
 
|1
 
|1
 
|Leendertse
 
|Leendertse
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|2
 
|2
 
|UNESCO
 
|UNESCO
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|3
 
|3
 
|Constant
 
|Constant
Line 11,069: Line 11,715:
 
|DEPOSITION
 
|DEPOSITION
 
|Checks if the tracers can deposited.
 
|Checks if the tracers can deposited.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,076: Line 11,725:
 
|DEPTH_CELLS
 
|DEPTH_CELLS
 
|Depth in Cells (from bottom)
 
|Depth in Cells (from bottom)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,083: Line 11,735:
 
|DEPTH_METERS
 
|DEPTH_METERS
 
|Depth of emission relativ to surface.
 
|Depth of emission relativ to surface.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,090: Line 11,745:
 
|DISCHARGE_FILE
 
|DISCHARGE_FILE
 
|A Link to the data file whichs contains the time serie of the variable flow
 
|A Link to the data file whichs contains the time serie of the variable flow
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,097: Line 11,755:
 
|DT_EMIT
 
|DT_EMIT
 
|The interval between emissions. By default this value is equal to DT_PARTIC
 
|The interval between emissions. By default this value is equal to DT_PARTIC
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,104: Line 11,765:
 
|DT_PARTIC
 
|DT_PARTIC
 
|Particle Time Step
 
|Particle Time Step
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Lagrangian
+
| rowspan="3" |Lagrangian
 
| rowspan="3" |EMISSION_SPATIAL
 
| rowspan="3" |EMISSION_SPATIAL
 
| rowspan="3" |Type of spatial emission.
 
| rowspan="3" |Type of spatial emission.
 
|Accident
 
|Accident
 
|Emission as accident
 
|Emission as accident
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|Box
 
|Box
 
|Emission from a Box
 
|Emission from a Box
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|Point
 
|Point
 
|Emission at a single point
 
|Emission at a single point
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
 
| rowspan="2" |EMISSION_TEMPORAL
 
| rowspan="2" |EMISSION_TEMPORAL
 
| rowspan="2" |Type of temporal emission
 
| rowspan="2" |Type of temporal emission
 
|Continuous
 
|Continuous
 
|Continuous emission
 
|Continuous emission
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|Instantaneous
 
|Instantaneous
 
|Instantaneous emission
 
|Instantaneous emission
Line 11,140: Line 11,804:
 
|EROSION_RATE
 
|EROSION_RATE
 
|Rate of tracers erosion.
 
|Rate of tracers erosion.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,147: Line 11,814:
 
|EULERIAN_MONITOR
 
|EULERIAN_MONITOR
 
|Path to a boxes file to integrate eulerian  concentrations based on lagrangian tracers
 
|Path to a boxes file to integrate eulerian  concentrations based on lagrangian tracers
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,155: Line 11,825:
 
|This property has an extinction parameter. This parameter can be use  
 
|This property has an extinction parameter. This parameter can be use  
 
to compute the effect of this property in the light extinction
 
to compute the effect of this property in the light extinction
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,162: Line 11,835:
 
|FLOAT
 
|FLOAT
 
|Indicates if the particle is a floating particle (e.g. oil)
 
|Indicates if the particle is a floating particle (e.g. oil)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,169: Line 11,845:
 
|FLOW
 
|FLOW
 
|The flow of the point emission
 
|The flow of the point emission
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,176: Line 11,855:
 
|FLOW_COLUMN
 
|FLOW_COLUMN
 
|The data column of the flow values which define the time serie of the variable flow
 
|The data column of the flow values which define the time serie of the variable flow
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,183: Line 11,865:
 
|FLOW_VARIABLE
 
|FLOW_VARIABLE
 
|Checks if the flow of the point emission is variable DT
 
|Checks if the flow of the point emission is variable DT
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,190: Line 11,875:
 
|GROUP_ID
 
|GROUP_ID
 
|The Group ID to which the origin belongs
 
|The Group ID to which the origin belongs
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,197: Line 11,885:
 
|INCRP
 
|INCRP
 
|Increment of grid cells to fill Boxes.
 
|Increment of grid cells to fill Boxes.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,204: Line 11,895:
 
|JET_DATA_FILE
 
|JET_DATA_FILE
 
|Link to the data file which contains the Plume / Jet parameterizations
 
|Link to the data file which contains the Plume / Jet parameterizations
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,211: Line 11,905:
 
|JET_DT
 
|JET_DT
 
|Time interval for the actualization of Plume Jet properties
 
|Time interval for the actualization of Plume Jet properties
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,218: Line 11,915:
 
|KILL_LAND_PARTICLES
 
|KILL_LAND_PARTICLES
 
|Kills particles which are located in a Waterpoint which is not a OpenPoint   
 
|Kills particles which are located in a Waterpoint which is not a OpenPoint   
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,226: Line 11,926:
 
|Check is the user wants to maintain  
 
|Check is the user wants to maintain  
 
the vertical relative position of the origin
 
the vertical relative position of the origin
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,232: Line 11,935:
 
|Lagrangian
 
|Lagrangian
 
|MIN_CONCENTRATION
 
|MIN_CONCENTRATION
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,240: Line 11,946:
 
|MIN_SED_VELOCITY
 
|MIN_SED_VELOCITY
 
|Minimum Sedimention velocity.
 
|Minimum Sedimention velocity.
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,247: Line 11,955:
 
|MONITOR_BOX
 
|MONITOR_BOX
 
|Link to the data file which contains the definition of the boxes used for particle "monitoring" (Residence Time)
 
|Link to the data file which contains the definition of the boxes used for particle "monitoring" (Residence Time)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,254: Line 11,965:
 
|MONITOR_BOX_PROP_MASS
 
|MONITOR_BOX_PROP_MASS
 
|Name of property to monitor mass in a box
 
|Name of property to monitor mass in a box
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
 
| rowspan="2" |MOVEMENT
 
| rowspan="2" |MOVEMENT
 
| rowspan="2" |Type of particle aleatory horizontal movement
 
| rowspan="2" |Type of particle aleatory horizontal movement
 
|NotRandom  
 
|NotRandom  
 
|Do not consider any aleatory horizontal component
 
|Do not consider any aleatory horizontal component
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|SullivanAllen
 
|SullivanAllen
 
|Parameterization based on Sullivan Allen formulation
 
|Parameterization based on Sullivan Allen formulation
Line 11,273: Line 11,988:
 
|MOVING_ORIGIN
 
|MOVING_ORIGIN
 
|Checks if the Origin has a moving location
 
|Checks if the Origin has a moving location
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,280: Line 11,998:
 
|MOVING_ORIGIN_COLUMN_X
 
|MOVING_ORIGIN_COLUMN_X
 
|The data column in which the X position values are given
 
|The data column in which the X position values are given
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,287: Line 12,008:
 
|MOVING_ORIGIN_COLUMN_Y
 
|MOVING_ORIGIN_COLUMN_Y
 
|The data column in which the Y position values are given
 
|The data column in which the Y position values are given
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,294: Line 12,018:
 
|MOVING_ORIGIN_FILE
 
|MOVING_ORIGIN_FILE
 
|A Link to the data file which contains the time serie of the position of the origin
 
|A Link to the data file which contains the time serie of the position of the origin
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
 
| rowspan="2" |MOVING_ORIGIN_UNITS
 
| rowspan="2" |MOVING_ORIGIN_UNITS
 
| rowspan="2" |Units in which the moving origin position is given
 
| rowspan="2" |Units in which the moving origin position is given
 
|Meters
 
|Meters
 
|The units are meters
 
|The units are meters
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|Cells
 
|Cells
 
|The units are given as cells
 
|The units are given as cells
Line 11,313: Line 12,041:
 
|NAME
 
|NAME
 
|Name of the property.
 
|Name of the property.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,320: Line 12,051:
 
|NBR_PARTIC
 
|NBR_PARTIC
 
|Number of Particles in each emission.
 
|Number of Particles in each emission.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,327: Line 12,061:
 
|NOWQM
 
|NOWQM
 
|To compute age without running moduleWQM.
 
|To compute age without running moduleWQM.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,334: Line 12,071:
 
|OLD
 
|OLD
 
|If the computation of this origin is continued from a previous run
 
|If the computation of this origin is continued from a previous run
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,341: Line 12,081:
 
|ORIGIN_NAME
 
|ORIGIN_NAME
 
|Name of the Origin. Origin Names must be unic.
 
|Name of the Origin. Origin Names must be unic.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
 
| rowspan="2" |OUTPUT_CONC
 
| rowspan="2" |OUTPUT_CONC
 
| rowspan="2" |Output Integration Type
 
| rowspan="2" |Output Integration Type
 
|1
 
|1
 
|Uses maximum values for integration
 
|Uses maximum values for integration
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|2
 
|2
 
|Uses average values for integration
 
|Uses average values for integration
Line 11,360: Line 12,104:
 
|OUTPUT_MAX_TRACER
 
|OUTPUT_MAX_TRACER
 
|Checks if the users wants to output the maximum tracer concentration in each cell
 
|Checks if the users wants to output the maximum tracer concentration in each cell
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,367: Line 12,114:
 
|OUTPUT_TIME
 
|OUTPUT_TIME
 
|Output Time
 
|Output Time
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,374: Line 12,124:
 
|OVERLAY_VELOCITY
 
|OVERLAY_VELOCITY
 
|Checks if the user wants to add an aditional velocity to the particles
 
|Checks if the user wants to add an aditional velocity to the particles
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,381: Line 12,134:
 
|PARTIC_BOX
 
|PARTIC_BOX
 
|Link to the data file which contains the definition of the boxes used for particle emission
 
|Link to the data file which contains the definition of the boxes used for particle emission
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,388: Line 12,144:
 
|PARTITION_COEF_SED
 
|PARTITION_COEF_SED
 
|Partition coefficent in the sediment.
 
|Partition coefficent in the sediment.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,395: Line 12,154:
 
|PARTITION_COEF_WATER
 
|PARTITION_COEF_WATER
 
|Partition coefficient in the water column.
 
|Partition coefficient in the water column.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,402: Line 12,164:
 
|PARTITION_COUPLE_SED
 
|PARTITION_COUPLE_SED
 
|Concentration of the dissolved phase in the intersticial water. The dissolved phase is admitted with a constant concentration.
 
|Concentration of the dissolved phase in the intersticial water. The dissolved phase is admitted with a constant concentration.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,410: Line 12,175:
 
|Concentration of the dissolved phase. The dissolved phase is admitted with a constant  
 
|Concentration of the dissolved phase. The dissolved phase is admitted with a constant  
 
concentration
 
concentration
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,417: Line 12,185:
 
|PARTITION_RATE_SED
 
|PARTITION_RATE_SED
 
|Rate of transfer between the two phases.
 
|Rate of transfer between the two phases.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,424: Line 12,195:
 
|PARTITION_RATE_WATER
 
|PARTITION_RATE_WATER
 
|Rate of transfer between the two phases.
 
|Rate of transfer between the two phases.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,432: Line 12,206:
 
|Checks if the tracers has two phases  
 
|Checks if the tracers has two phases  
 
(adsorbe and dissolved) in the sediment
 
(adsorbe and dissolved) in the sediment
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,440: Line 12,217:
 
|Checks if the tracers has two phases  
 
|Checks if the tracers has two phases  
 
(adsorbe and dissolved) in the water column.
 
(adsorbe and dissolved) in the water column.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,447: Line 12,227:
 
|POINT_VOLUME
 
|POINT_VOLUME
 
|Volume of instantanous emission
 
|Volume of instantanous emission
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,454: Line 12,237:
 
|POSITION_CELLS
 
|POSITION_CELLS
 
|X and Y Position of the origin in grid cells.
 
|X and Y Position of the origin in grid cells.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,461: Line 12,247:
 
|POSITION_METERS
 
|POSITION_METERS
 
|X and Y Position of the origin in meters.
 
|X and Y Position of the origin in meters.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,468: Line 12,257:
 
|RESTART_FILE_OUTPUT_TIME
 
|RESTART_FILE_OUTPUT_TIME
 
|Output Time to write restart files
 
|Output Time to write restart files
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,475: Line 12,267:
 
|RESTART_FILE_OVERWRITE
 
|RESTART_FILE_OVERWRITE
 
|Defines whether to overwrite the output restart file or not. By default, the output restart is not overwritten
 
|Defines whether to overwrite the output restart file or not. By default, the output restart is not overwritten
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,482: Line 12,277:
 
|SED_VELOCITY
 
|SED_VELOCITY
 
|Sedimentation Velocity.
 
|Sedimentation Velocity.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
 
| rowspan="2" |SEDIMENTATION
 
| rowspan="2" |SEDIMENTATION
 
| rowspan="2" |Sedimentation type.
 
| rowspan="2" |Sedimentation type.
 
|Imposed
 
|Imposed
 
|
 
|
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|Stokes
 
|Stokes
 
|
 
|
Line 11,501: Line 12,300:
 
|SPLIT_PART
 
|SPLIT_PART
 
|Split big particles.
 
|Split big particles.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,508: Line 12,310:
 
|START_PARTIC_EMIT
 
|START_PARTIC_EMIT
 
|The Start Time of the continuous emission. By default is equal to the model start time.
 
|The Start Time of the continuous emission. By default is equal to the model start time.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,515: Line 12,320:
 
|STATISTICS
 
|STATISTICS
 
|Wheter to calculate or not the statistic.
 
|Wheter to calculate or not the statistic.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,522: Line 12,330:
 
|STATISTICS_FILE
 
|STATISTICS_FILE
 
|File name with the statistics definition.
 
|File name with the statistics definition.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,529: Line 12,340:
 
|STATISTICS_LAG
 
|STATISTICS_LAG
 
|Do a frequency analysis tracer by tracer.
 
|Do a frequency analysis tracer by tracer.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,536: Line 12,350:
 
|STOP_PARTIC_EMIT
 
|STOP_PARTIC_EMIT
 
|The Stop Time of the continuous emission. By default is equal to the model end time.
 
|The Stop Time of the continuous emission. By default is equal to the model end time.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,543: Line 12,360:
 
|T90
 
|T90
 
|Coliform Decay rate.
 
|Coliform Decay rate.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
| rowspan="2" |T90_VAR_METHOD_1
+
| rowspan="2" |T90_VAR_METHOD_1
 
| rowspan="2" |Method to compute T90 function.
 
| rowspan="2" |Method to compute T90 function.
 
|1
 
|1
 
|Fecal decay according to Canteras ''et al.'' (1995)
 
|Fecal decay according to Canteras ''et al.'' (1995)
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|2
 
|2
 
|Fecal decay according to Chapra (1997)
 
|Fecal decay according to Chapra (1997)
Line 11,562: Line 12,382:
 
|T90_VARIABLE
 
|T90_VARIABLE
 
|Check if the user wants to compute T90 function of ambient properties: salinity,temperature,light.
 
|Check if the user wants to compute T90 function of ambient properties: salinity,temperature,light.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,569: Line 12,392:
 
|TAU_DEP
 
|TAU_DEP
 
|Critical shear stress of deposition.
 
|Critical shear stress of deposition.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,576: Line 12,402:
 
|TAU_ERO
 
|TAU_ERO
 
|Critical shear stress of erosion.
 
|Critical shear stress of erosion.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,583: Line 12,412:
 
|THEORIC_AREA
 
|THEORIC_AREA
 
|Uses Theoric Area for Oil Processes.
 
|Uses Theoric Area for Oil Processes.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,590: Line 12,422:
 
|THICKNESS_METERS
 
|THICKNESS_METERS
 
|The initial thickness of the particles. (For floating particle only). (Used to calculate the area if the emission is accident and the total number of particles if the emission is box)
 
|The initial thickness of the particles. (For floating particle only). (Used to calculate the area if the emission is accident and the total number of particles if the emission is box)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,597: Line 12,432:
 
|TIME_DECAY
 
|TIME_DECAY
 
|Decay time is used to compute a relxation term that makes the critical shear stress of erosion tend to the average tracer erosion rate of the cell where the tracer is deposited.
 
|Decay time is used to compute a relxation term that makes the critical shear stress of erosion tend to the average tracer erosion rate of the cell where the tracer is deposited.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,604: Line 12,442:
 
|TIME_SERIE
 
|TIME_SERIE
 
|Checks if the user wants to write time series of the particle properties
 
|Checks if the user wants to write time series of the particle properties
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,611: Line 12,452:
 
|TIME_SERIE_LOCATION
 
|TIME_SERIE_LOCATION
 
|Gets the position of the water points in the Map Module.
 
|Gets the position of the water points in the Map Module.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
 
| rowspan="2" |TURB_V
 
| rowspan="2" |TURB_V
 
| rowspan="2" |Vertical turbulence parameterization
 
| rowspan="2" |Vertical turbulence parameterization
 
|Constant
 
|Constant
 
|Constant Parameterization
 
|Constant Parameterization
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|Profile
 
|Profile
 
|Parameterization based on the velocity profile
 
|Parameterization based on the velocity profile
Line 11,631: Line 12,476:
 
|Time needed for a particle to double volume.
 
|Time needed for a particle to double volume.
 
Turns particles volume variation on.
 
Turns particles volume variation on.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,638: Line 12,486:
 
|UNITS
 
|UNITS
 
|Units of the property.
 
|Units of the property.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,645: Line 12,496:
 
|VARVELH
 
|VARVELH
 
|Definition of the Horizontal and Vertical variance in the form of a percentage of the average velocity UStandardDeviation = VarVelHX * Vel + VarVelH
 
|Definition of the Horizontal and Vertical variance in the form of a percentage of the average velocity UStandardDeviation = VarVelHX * Vel + VarVelH
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,652: Line 12,506:
 
|VARVELHX
 
|VARVELHX
 
|Definition of the Horizontal and Vertical variance in the form of a percentage of the average velocity  UStandardDeviation = VarVelHX * Vel + VarVelH
 
|Definition of the Horizontal and Vertical variance in the form of a percentage of the average velocity  UStandardDeviation = VarVelHX * Vel + VarVelH
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,659: Line 12,516:
 
|VARVELV
 
|VARVELV
 
|Definition of the Horizontal and Vertical variance in the form of a percentage of the average velocity UStandardDeviation = VarVelVX * Vel + VarVelV
 
|Definition of the Horizontal and Vertical variance in the form of a percentage of the average velocity UStandardDeviation = VarVelVX * Vel + VarVelV
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,666: Line 12,526:
 
|VARVELVX
 
|VARVELVX
 
|Definition of the Horizontal and Vertical variance in the form of a percentage of the average velocity UStandardDeviation = VarVelVX * Vel + VarVelV
 
|Definition of the Horizontal and Vertical variance in the form of a percentage of the average velocity UStandardDeviation = VarVelVX * Vel + VarVelV
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,672: Line 12,535:
 
|Lagrangian
 
|Lagrangian
 
|VISCCINREF
 
|VISCCINREF
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,680: Line 12,546:
 
|VOLFAC
 
|VOLFAC
 
|Factor which indicates when a particle with variable volume is to be deleted (Volume > Initial Volume * VOLFAC)
 
|Factor which indicates when a particle with variable volume is to be deleted (Volume > Initial Volume * VOLFAC)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Lagrangian
+
| rowspan="2" |Lagrangian
 
| rowspan="2" |VOLUME_INCREASE
 
| rowspan="2" |VOLUME_INCREASE
 
| rowspan="2" |How volume increase is calculated
 
| rowspan="2" |How volume increase is calculated
 
|Double
 
|Double
 
|The doublication occur after the time given by TVOL200
 
|The doublication occur after the time given by TVOL200
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Lagrangian
 
 
|Velocity
 
|Velocity
 
|The doublication occur after the time given by TVOL200, but also depends on the local velocity
 
|The doublication occur after the time given by TVOL200, but also depends on the local velocity
Line 11,699: Line 12,569:
 
|WINDCOEF
 
|WINDCOEF
 
|Wind transfer Coefficient
 
|Wind transfer Coefficient
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,708: Line 12,581:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|Lagrangian
 
|Lagrangian
Line 11,773: Line 12,649:
 
|API
 
|API
 
|American Petroleum Institute (API) Gravity
 
|American Petroleum Institute (API) Gravity
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,780: Line 12,659:
 
|ASPHALTENECONTENT
 
|ASPHALTENECONTENT
 
|Asphaltene Content
 
|Asphaltene Content
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,787: Line 12,669:
 
|CEMULS
 
|CEMULS
 
|Emulsification Constant ((% of evaporated oil before emulsification brgins)
 
|Emulsification Constant ((% of evaporated oil before emulsification brgins)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,794: Line 12,679:
 
|CPDISTEXP
 
|CPDISTEXP
 
|Cumulative Volume Fraction of Oil Distilled
 
|Cumulative Volume Fraction of Oil Distilled
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Oil
+
| rowspan="2" |Oil
 
| rowspan="2" |DISPERSIONMETHOD
 
| rowspan="2" |DISPERSIONMETHOD
 
| rowspan="2" |Method for Dispersion
 
| rowspan="2" |Method for Dispersion
 
|Delvigne
 
|Delvigne
 
|Dispersion parameterized with Delvigne formulation
 
|Dispersion parameterized with Delvigne formulation
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Oil
 
 
|Mackay
 
|Mackay
 
|Dispersion parameterized with Mackay formulation
 
|Dispersion parameterized with Mackay formulation
Line 11,813: Line 12,702:
 
|DT_OIL_INTPROCESSES
 
|DT_OIL_INTPROCESSES
 
|Time Step used in computation of oil internal processes
 
|Time Step used in computation of oil internal processes
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,820: Line 12,712:
 
|EFFICIENCY
 
|EFFICIENCY
 
|% of Area sprayed effectively dispersed
 
|% of Area sprayed effectively dispersed
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Oil
+
| rowspan="2" |Oil
 
| rowspan="2" |EMULSIFICATIONMETHOD
 
| rowspan="2" |EMULSIFICATIONMETHOD
 
| rowspan="2" |Method for Emulsification
 
| rowspan="2" |Method for Emulsification
 
|Mackay
 
|Mackay
 
|Emulsification parameterized following Mackay formulation
 
|Emulsification parameterized following Mackay formulation
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Oil
 
 
|Rasmussen
 
|Rasmussen
 
|Emulsification parameterized following Rasmussen formulation
 
|Emulsification parameterized following Rasmussen formulation
Line 11,839: Line 12,735:
 
|EmulsParameter
 
|EmulsParameter
 
|Water Uptake Parameter
 
|Water Uptake Parameter
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,846: Line 12,745:
 
|END_CHEM_DISPERSION
 
|END_CHEM_DISPERSION
 
|Ending Time of Dispersant Application
 
|Ending Time of Dispersant Application
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,853: Line 12,755:
 
|END_MEC_CLEANUP
 
|END_MEC_CLEANUP
 
|Ending Time of Mechanical Cleanup Operation
 
|Ending Time of Mechanical Cleanup Operation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Oil
+
| rowspan="3" |Oil
 
| rowspan="3" |EVAPORATIONMETHOD
 
| rowspan="3" |EVAPORATIONMETHOD
 
| rowspan="3" |Method for Evaporation
 
| rowspan="3" |Method for Evaporation
 
|EvaporativeExposure
 
|EvaporativeExposure
 
|Evaporation computed with evaporative exposure method
 
|Evaporation computed with evaporative exposure method
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Oil
 
 
|Fingas
 
|Fingas
 
|Evaporation computed with Fingas formulations
 
|Evaporation computed with Fingas formulations
 
|-
 
|-
| Water
 
|Oil
 
 
|PseudoComponents
 
|PseudoComponents
 
|Evaporation computed with pseudocomponents method
 
|Evaporation computed with pseudocomponents method
Line 11,877: Line 12,781:
 
|FINGAS_EVAP_CONST1
 
|FINGAS_EVAP_CONST1
 
|Fingas Empirical Constant 1 (Necessary If Fingas_Evap_Emp_Data = 1)
 
|Fingas Empirical Constant 1 (Necessary If Fingas_Evap_Emp_Data = 1)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,884: Line 12,791:
 
|FINGAS_EVAP_CONST2
 
|FINGAS_EVAP_CONST2
 
|Fingas Empirical Constant 2 (Necessary If Fingas_Evap_Emp_Data = 1)
 
|Fingas Empirical Constant 2 (Necessary If Fingas_Evap_Emp_Data = 1)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,891: Line 12,801:
 
|FINGAS_EVAP_EMP_DATA
 
|FINGAS_EVAP_EMP_DATA
 
|Knowledge of Empirical Data for Evaporation
 
|Knowledge of Empirical Data for Evaporation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Oil
+
| rowspan="2" |Oil
 
| rowspan="2" |FINGAS_EVAP_EQTYPE
 
| rowspan="2" |FINGAS_EVAP_EQTYPE
 
| rowspan="2" |Evaporation Equation Type
 
| rowspan="2" |Evaporation Equation Type
 
|Logarithmic
 
|Logarithmic
 
|Logarithmic Equation Type for Evaporation
 
|Logarithmic Equation Type for Evaporation
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Oil
 
 
|SquareRoot
 
|SquareRoot
 
|Square Root Equation Type for Evaporation
 
|Square Root Equation Type for Evaporation
Line 11,910: Line 12,824:
 
|MAXVWATERCONTENT
 
|MAXVWATERCONTENT
 
|Maximum Volume Water Content
 
|Maximum Volume Water Content
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,919: Line 12,836:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|Oil
 
|Oil
 
|OIL_CHEM_DISPERSION
 
|OIL_CHEM_DISPERSION
 
|Computes Chemical Dispersants Application
 
|Computes Chemical Dispersants Application
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,931: Line 12,854:
 
|OIL_DISPERSION
 
|OIL_DISPERSION
 
|Computes Oil Dispersion Process
 
|Computes Oil Dispersion Process
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,938: Line 12,864:
 
|OIL_DISSOLUTION
 
|OIL_DISSOLUTION
 
|Computes Oil Dissolution Process
 
|Computes Oil Dissolution Process
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,945: Line 12,874:
 
|OIL_EMULSIFICATION
 
|OIL_EMULSIFICATION
 
|Computes oil emulsification process
 
|Computes oil emulsification process
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,952: Line 12,884:
 
|OIL_EVAPORATION
 
|OIL_EVAPORATION
 
|Computes Oil Evaporation Process
 
|Computes Oil Evaporation Process
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,959: Line 12,894:
 
|OIL_MEC_CLEANUP
 
|OIL_MEC_CLEANUP
 
|Computes Mechanical Cleanup Operation
 
|Computes Mechanical Cleanup Operation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,966: Line 12,904:
 
|OIL_SEDIMENTATION
 
|OIL_SEDIMENTATION
 
|Computes Oil Sedimentation Process
 
|Computes Oil Sedimentation Process
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,973: Line 12,914:
 
|OIL_SPREADING
 
|OIL_SPREADING
 
|Computes Oil Spreading Process
 
|Computes Oil Spreading Process
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 11,980: Line 12,924:
 
|OIL_TIMESERIE
 
|OIL_TIMESERIE
 
|Name of the Output results file
 
|Name of the Output results file
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Oil
+
| rowspan="2" |Oil
 
| rowspan="2" |OILTYPE
 
| rowspan="2" |OILTYPE
 
| rowspan="2" |Oil Type
 
| rowspan="2" |Oil Type
 
|Crude
 
|Crude
 
|Crude Oil
 
|Crude Oil
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Oil
 
 
|Refined
 
|Refined
 
|Refined oil
 
|Refined oil
Line 11,999: Line 12,947:
 
|OWINTERFACIALTENSION
 
|OWINTERFACIALTENSION
 
|Oil-Water Interfacial Tension
 
|Oil-Water Interfacial Tension
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,006: Line 12,957:
 
|P_AREA_SPRAYED
 
|P_AREA_SPRAYED
 
|% of Spill Area sprayed whit dispersant
 
|% of Spill Area sprayed whit dispersant
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,013: Line 12,967:
 
|PERC_MASSDIST180
 
|PERC_MASSDIST180
 
|%(Wheight) of Oil Evaporated until 180ºC (Necessary If Fingas_Evap_Emp_Data = 0)
 
|%(Wheight) of Oil Evaporated until 180ºC (Necessary If Fingas_Evap_Emp_Data = 0)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,020: Line 12,977:
 
|POURPOINT
 
|POURPOINT
 
|Pour Point
 
|Pour Point
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,027: Line 12,987:
 
|RECOVERY
 
|RECOVERY
 
|rate or volume of Emulsion Recovered
 
|rate or volume of Emulsion Recovered
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,034: Line 12,997:
 
|RECOVERY_DATAFORM
 
|RECOVERY_DATAFORM
 
|DataForm of emulsion recovered
 
|DataForm of emulsion recovered
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|Oil
+
| rowspan="2" |Oil
 
| rowspan="2" |SPREADINGMETHOD
 
| rowspan="2" |SPREADINGMETHOD
 
| rowspan="2" |Method for Spreading
 
| rowspan="2" |Method for Spreading
 
|Fay
 
|Fay
 
|Mechanical spreading simply based on Fay theory
 
|Mechanical spreading simply based on Fay theory
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|Oil
 
 
|ThicknessGradient
 
|ThicknessGradient
 
|Oil mechanical spreading based on thickness gradients, parameterised with fay theory
 
|Oil mechanical spreading based on thickness gradients, parameterised with fay theory
Line 12,053: Line 13,020:
 
|START_CHEM_DISPERSION
 
|START_CHEM_DISPERSION
 
|Starting Time of Dispersant Application
 
|Starting Time of Dispersant Application
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,060: Line 13,030:
 
|START_MEC_CLEANUP
 
|START_MEC_CLEANUP
 
|Starting Time of Mechanical Cleanup Operation
 
|Starting Time of Mechanical Cleanup Operation
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,067: Line 13,040:
 
|TDISTEXP
 
|TDISTEXP
 
|Vapour Temperature of Distillate
 
|Vapour Temperature of Distillate
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,074: Line 13,050:
 
|TEMPVISCREF
 
|TEMPVISCREF
 
|Temperature of Reference Viscosity
 
|Temperature of Reference Viscosity
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,081: Line 13,060:
 
|USERCOEFVELMANCHA
 
|USERCOEFVELMANCHA
 
|Empirical Thickness Gradient's Spreading Velocity Coefficient
 
|Empirical Thickness Gradient's Spreading Velocity Coefficient
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,088: Line 13,070:
 
|VISCCINREF
 
|VISCCINREF
 
|Reference Cinematic Viscosity
 
|Reference Cinematic Viscosity
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,095: Line 13,080:
 
|VISCREF
 
|VISCREF
 
|Reference Dynamic Viscosity
 
|Reference Dynamic Viscosity
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,127: Line 13,115:
 
|BATHYM_EVOLUTION
 
|BATHYM_EVOLUTION
 
|it´s a conditional keyword: check if the user wants to let the bathymetry evolve due to sand transport
 
|it´s a conditional keyword: check if the user wants to let the bathymetry evolve due to sand transport
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,134: Line 13,125:
 
|BATIM_DT
 
|BATIM_DT
 
|The time step of the BATIM evolution
 
|The time step of the BATIM evolution
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,141: Line 13,135:
 
|BOUNDARY
 
|BOUNDARY
 
|check what type off boundary condition the user wants: 1 -> NullGradient, 2 -> Cyclic
 
|check what type off boundary condition the user wants: 1 -> NullGradient, 2 -> Cyclic
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,148: Line 13,145:
 
|BOX_FILENAME
 
|BOX_FILENAME
 
|path to the file where the boxes are defined
 
|path to the file where the boxes are defined
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,155: Line 13,155:
 
|BOXFLUXES
 
|BOXFLUXES
 
|It´s a conditional keyword to compute fluxes between boxes
 
|It´s a conditional keyword to compute fluxes between boxes
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,162: Line 13,165:
 
|CLASS_ID
 
|CLASS_ID
 
|??
 
|??
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,169: Line 13,175:
 
|CLASS_NAME
 
|CLASS_NAME
 
|??
 
|??
 
+
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,177: Line 13,185:
 
|CLASSES_NUMBER
 
|CLASSES_NUMBER
 
|The number of sand classes the user wants to define
 
|The number of sand classes the user wants to define
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,184: Line 13,195:
 
|CRITICAL_SLOP
 
|CRITICAL_SLOP
 
|slope above which there is lateral erosion.
 
|slope above which there is lateral erosion.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,191: Line 13,205:
 
|DENS_SAND
 
|DENS_SAND
 
|Sand density
 
|Sand density
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,198: Line 13,215:
 
|DISCHARGES
 
|DISCHARGES
 
|??
 
|??
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,204: Line 13,224:
 
|Sand
 
|Sand
 
|FILTER_RADIUS
 
|FILTER_RADIUS
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,212: Line 13,235:
 
|FILTER_SCHEME
 
|FILTER_SCHEME
 
|the keyword can be equal to NO FILTER or MODIFY LAX.  
 
|the keyword can be equal to NO FILTER or MODIFY LAX.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,219: Line 13,245:
 
|FLUX_SLOP
 
|FLUX_SLOP
 
|??
 
|??
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,226: Line 13,255:
 
|OLD
 
|OLD
 
|it´s a conditional keyword: check if the user wants to start from the final condition of a previous run  
 
|it´s a conditional keyword: check if the user wants to start from the final condition of a previous run  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,233: Line 13,265:
 
|OUTPUT_TIME
 
|OUTPUT_TIME
 
|output time step
 
|output time step
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,240: Line 13,275:
 
|POROSITY
 
|POROSITY
 
|porosity of the sediments
 
|porosity of the sediments
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,247: Line 13,285:
 
|SAND_DT
 
|SAND_DT
 
|The time step of the SAND evolution
 
|The time step of the SAND evolution
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,254: Line 13,295:
 
|SAND_MIN
 
|SAND_MIN
 
|The minimum sand layer thickness
 
|The minimum sand layer thickness
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,261: Line 13,305:
 
|SMOOTH_SLOP
 
|SMOOTH_SLOP
 
|it´s a conditional keyword: check if the user wants to compute transport in strong slopes
 
|it´s a conditional keyword: check if the user wants to compute transport in strong slopes
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,268: Line 13,315:
 
|TAU_MAX
 
|TAU_MAX
 
|the maximum bottom shear stress
 
|the maximum bottom shear stress
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,275: Line 13,325:
 
|TIME_SERIE
 
|TIME_SERIE
 
|it´s a conditional keyword: checks out if the user pretends to write a time serie for the transport fluxes
 
|it´s a conditional keyword: checks out if the user pretends to write a time serie for the transport fluxes
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,282: Line 13,335:
 
|TIME_SERIE_LOCATION
 
|TIME_SERIE_LOCATION
 
|path to the file where the boxes are defined
 
|path to the file where the boxes are defined
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,289: Line 13,345:
 
|TRANSPORT_FACTOR
 
|TRANSPORT_FACTOR
 
|it´s a factor to amplify the transport
 
|it´s a factor to amplify the transport
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,321: Line 13,380:
 
|ADVECTION_DIFFUSION
 
|ADVECTION_DIFFUSION
 
|Compute property advection-diffusion
 
|Compute property advection-diffusion
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,328: Line 13,390:
 
|BIOTURBATION
 
|BIOTURBATION
 
|Compute bioturbation processes
 
|Compute bioturbation processes
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,335: Line 13,400:
 
|BIOTURBATION_COEF
 
|BIOTURBATION_COEF
 
|Bioturbation diffusion coefficient  
 
|Bioturbation diffusion coefficient  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,342: Line 13,410:
 
|BIOTURBATION_DECAY_COEF
 
|BIOTURBATION_DECAY_COEF
 
|Decay factor to compute decay of bioturbation effect
 
|Decay factor to compute decay of bioturbation effect
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,349: Line 13,420:
 
|BIOTURBATION_DEPTH
 
|BIOTURBATION_DEPTH
 
|Depth till which bioturbation diffusion is constant (m)
 
|Depth till which bioturbation diffusion is constant (m)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,356: Line 13,430:
 
|BOX_TIME_SERIE
 
|BOX_TIME_SERIE
 
|Ouputs results in box time series
 
|Ouputs results in box time series
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,363: Line 13,440:
 
|BOXFLUXES
 
|BOXFLUXES
 
|Path to boxes file. If specified in input data file, computes box integration based on the defined file.  
 
|Path to boxes file. If specified in input data file, computes box integration based on the defined file.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,370: Line 13,450:
 
|DESCRIPTION
 
|DESCRIPTION
 
|Brief description of the property
 
|Brief description of the property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|SedimentProperties
+
| rowspan="2" |SedimentProperties
 
| rowspan="2" |DIFFUSION_METHOD
 
| rowspan="2" |DIFFUSION_METHOD
 
| rowspan="2" |Method to compute diffusion coefficient correction for the sediments
 
| rowspan="2" |Method to compute diffusion coefficient correction for the sediments
 
|1
 
|1
 
|Berner, 1980
 
|Berner, 1980
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 
|-
 
|-
| Water
 
|SedimentProperties
 
 
|2
 
|2
 
|Soetaert, 1996
 
|Soetaert, 1996
Line 12,389: Line 13,473:
 
|IS_COEF
 
|IS_COEF
 
|Conversion factor to I.S. units
 
|Conversion factor to I.S. units
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,396: Line 13,483:
 
|MIN_VALUE
 
|MIN_VALUE
 
|Minimum allowed value of property concentration  
 
|Minimum allowed value of property concentration  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,403: Line 13,493:
 
|MOLECULAR_DIFF_COEF
 
|MOLECULAR_DIFF_COEF
 
|Infinite dilution molecular diffusion coefficient
 
|Infinite dilution molecular diffusion coefficient
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,410: Line 13,503:
 
|NAME
 
|NAME
 
|Property name
 
|Property name
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,417: Line 13,513:
 
|OLD
 
|OLD
 
|Initialization from previous run (overrides FillMatrix)
 
|Initialization from previous run (overrides FillMatrix)
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,424: Line 13,523:
 
|OUTPUT_HDF
 
|OUTPUT_HDF
 
|Ouputs results in HDF5 format
 
|Ouputs results in HDF5 format
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,431: Line 13,533:
 
|OUTPUT_TIME
 
|OUTPUT_TIME
 
|Vector with instants (starting from 0) when to perform outputs. The last number in the vector is the time step to perform the remaining outputs.  
 
|Vector with instants (starting from 0) when to perform outputs. The last number in the vector is the time step to perform the remaining outputs.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,438: Line 13,543:
 
|PARTICULATE
 
|PARTICULATE
 
|Property physical state: 0 - Dissolved ; 1 - Particulate
 
|Property physical state: 0 - Dissolved ; 1 - Particulate
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,445: Line 13,553:
 
|PARTITION
 
|PARTITION
 
|Compute partition between dissolved-particulate phases
 
|Compute partition between dissolved-particulate phases
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,452: Line 13,563:
 
|PARTITION_COUPLE
 
|PARTITION_COUPLE
 
|Name of the property (oposite phase) to compute partition
 
|Name of the property (oposite phase) to compute partition
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,459: Line 13,573:
 
|SEDIMENT_QUALITY
 
|SEDIMENT_QUALITY
 
|Compute sediment quality processes
 
|Compute sediment quality processes
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,468: Line 13,585:
 
|
 
|
 
|
 
|
|-
+
|
 +
|
 +
|
 +
|-
 
| Water
 
| Water
 
|SedimentProperties
 
|SedimentProperties
 
|TIME_SERIE
 
|TIME_SERIE
 
|Output time series for sediment property
 
|Output time series for sediment property
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,480: Line 13,603:
 
|TIME_SERIE_LOCATION
 
|TIME_SERIE_LOCATION
 
|Path to time serie locations file
 
|Path to time serie locations file
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,637: Line 13,763:
 
| Water
 
| Water
 
|Turbulence
 
|Turbulence
|Background_Viscosity
+
|BACKGROUND_VISCOSITY
 
|Background viscosity/diffusivity.  
 
|Background viscosity/diffusivity.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,646: Line 13,775:
 
|CONST_MIXING_LENGTH_HORIZONTAL
 
|CONST_MIXING_LENGTH_HORIZONTAL
 
|Default horizontal mixing length. Used to compute the random trajectory of particle (Lagrangian Module
 
|Default horizontal mixing length. Used to compute the random trajectory of particle (Lagrangian Module
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,653: Line 13,785:
 
|CONTINUOUS
 
|CONTINUOUS
 
|Check if the user wants to perform a simulation startinf from a previous run (1) or not (0).
 
|Check if the user wants to perform a simulation startinf from a previous run (1) or not (0).
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,660: Line 13,795:
 
|DT_OUTPUT_TIME
 
|DT_OUTPUT_TIME
 
|Time interval for time serie.
 
|Time interval for time serie.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,667: Line 13,805:
 
|HORCON
 
|HORCON
 
|Smaagorinsky coefficient. Used only if MODVISH is "smagorinsky".
 
|Smaagorinsky coefficient. Used only if MODVISH is "smagorinsky".
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,674: Line 13,815:
 
|HREF_VIS
 
|HREF_VIS
 
|Water column reference thickness used in the for the option MODVISH "estuary".
 
|Water column reference thickness used in the for the option MODVISH "estuary".
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,681: Line 13,825:
 
|MIXLENGTH_MAX
 
|MIXLENGTH_MAX
 
|Maximum allowed mixing length. Parameter used in the Nihoul and Leendertse parameterization.
 
|Maximum allowed mixing length. Parameter used in the Nihoul and Leendertse parameterization.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,688: Line 13,835:
 
|MIXLENGTH_V
 
|MIXLENGTH_V
 
|Default vertical mixing length. Used to compute the random trajectory of particle (Lagrangian Module).
 
|Default vertical mixing length. Used to compute the random trajectory of particle (Lagrangian Module).
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,695: Line 13,845:
 
|MLD
 
|MLD
 
|Checks out if the user pretends to compute the mixed layer length (1) or not (0).
 
|Checks out if the user pretends to compute the mixed layer length (1) or not (0).
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,702: Line 13,855:
 
|MLD_BOTTOM
 
|MLD_BOTTOM
 
|Checks out if the user pretends to compute the bottom mixed layer length (1) or not (0).  
 
|Checks out if the user pretends to compute the bottom mixed layer length (1) or not (0).  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|Turbulence
+
| rowspan="3" |Turbulence
 
| rowspan="3" |MLD_Method
 
| rowspan="3" |MLD_Method
 
| rowspan="3" |
 
| rowspan="3" |
 
|1
 
|1
 
|Turbulent kinetic energy (TKE) inferior to a predefined minimum.
 
|Turbulent kinetic energy (TKE) inferior to a predefined minimum.
 +
| rowspan="3" |
 +
| rowspan="3" |
 +
| rowspan="3" |
 
|-
 
|-
| Water
 
|Turbulence
 
 
|2
 
|2
 
|Richardson number (Ri) superior to a critical value.
 
|Richardson number (Ri) superior to a critical value.
 
|-
 
|-
| Water
 
|Turbulence
 
 
|3
 
|3
 
|Maximum value of Brunt-Vaisalla frequency (N)
 
|Maximum value of Brunt-Vaisalla frequency (N)
 
|-
 
|-
| Water
+
| rowspan="7" |Water
|Turbulence
+
| rowspan="7" |Turbulence
 
| rowspan="7" |MODTURB
 
| rowspan="7" |MODTURB
 
| rowspan="7" |Vertical eddy viscosity model
 
| rowspan="7" |Vertical eddy viscosity model
 
|backhaus
 
|backhaus
 
|Uses Backhaus turbulence scheme.
 
|Uses Backhaus turbulence scheme.
 +
| rowspan="7" |
 +
| rowspan="7" |
 +
| rowspan="7" |
 
|-
 
|-
| Water
 
|Turbulence
 
 
|constant
 
|constant
 
|Constant eddy viscosity model. Viscosity value is specified with keyword "VISCOSITY_V". Typical values for real (ocean or estuaries) are in the range 0.1 - 10, depending on vertical length scale and vertical grid spacing.  
 
|Constant eddy viscosity model. Viscosity value is specified with keyword "VISCOSITY_V". Typical values for real (ocean or estuaries) are in the range 0.1 - 10, depending on vertical length scale and vertical grid spacing.  
 
|-
 
|-
| Water
 
|Turbulence
 
 
|file2D
 
|file2D
 
|Vertical viscosity is specified using an ASCII file containing grid data. The file is defined in the block: begin_viscosity_v/end_viscosity_v. Use of this block is specified in the FillMatrix module (Mohid Base 2 project)  
 
|Vertical viscosity is specified using an ASCII file containing grid data. The file is defined in the block: begin_viscosity_v/end_viscosity_v. Use of this block is specified in the FillMatrix module (Mohid Base 2 project)  
 
|-
 
|-
| Water
 
|Turbulence
 
 
|leendertsee
 
|leendertsee
 
|Uses Leendertsee turbulence scheme.
 
|Uses Leendertsee turbulence scheme.
 
|-
 
|-
| Water
 
|Turbulence
 
 
|nihoul
 
|nihoul
 
|Uses Nihoul turbulence scheme.
 
|Uses Nihoul turbulence scheme.
 
|-
 
|-
| Water
 
|Turbulence
 
 
|pacanowski
 
|pacanowski
 
|Uses Pacanowski turbulence scheme.
 
|Uses Pacanowski turbulence scheme.
 
|-
 
|-
| Water
 
|Turbulence
 
 
|turbulence_equation
 
|turbulence_equation
 
|Uses a turbulence equation for closure. This is only to be used with GOTM module.
 
|Uses a turbulence equation for closure. This is only to be used with GOTM module.
 
|-
 
|-
| Water
+
| rowspan="4" |Water
|Turbulence
+
| rowspan="4" |Turbulence
 
| rowspan="4" |MODVISH
 
| rowspan="4" |MODVISH
 
| rowspan="4" |Horizontal eddy viscosity model.
 
| rowspan="4" |Horizontal eddy viscosity model.
 
|constant
 
|constant
 
|Constant horizontal viscosity
 
|Constant horizontal viscosity
 +
| rowspan="4" |
 +
| rowspan="4" |
 +
| rowspan="4" |
 
|-
 
|-
| Water
 
|Turbulence
 
 
|estuary
 
|estuary
 
|
 
|
 
|-
 
|-
| Water
 
|Turbulence
 
 
|file2D
 
|file2D
 
|Horizontal viscosity is specified using an ASCII file containing grid data. The file is defined in the block: begin_viscosity_v/end_viscosity_v. Use of this block is specified in the FillMatrix module (Mohid Base 2 project)
 
|Horizontal viscosity is specified using an ASCII file containing grid data. The file is defined in the block: begin_viscosity_v/end_viscosity_v. Use of this block is specified in the FillMatrix module (Mohid Base 2 project)
 
|-
 
|-
| Water
 
|Turbulence
 
 
|smagorinsky
 
|smagorinsky
 
|Smagorinsky turbulence scheme.
 
|Smagorinsky turbulence scheme.
Line 12,785: Line 13,928:
 
|NYQUIST
 
|NYQUIST
 
|Nyquist frequency used for mixing length calculation.
 
|Nyquist frequency used for mixing length calculation.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,792: Line 13,938:
 
|OUTPUT_PROFILE
 
|OUTPUT_PROFILE
 
|Perform profile outputs in HDF5
 
|Perform profile outputs in HDF5
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,799: Line 13,948:
 
|OUTPUT_TIDE
 
|OUTPUT_TIDE
 
|Checks out if the user pretends to write tidal information in HDF output (1) or not (0).
 
|Checks out if the user pretends to write tidal information in HDF output (1) or not (0).
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,806: Line 13,958:
 
|OUTPUT_TIME
 
|OUTPUT_TIME
 
|Intrevals of time between outputs.  
 
|Intrevals of time between outputs.  
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,813: Line 13,968:
 
|PRANDTL_0
 
|PRANDTL_0
 
|Vertical Prandtl number
 
|Vertical Prandtl number
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,820: Line 13,978:
 
|RESTART_FILE_OVERWRITE
 
|RESTART_FILE_OVERWRITE
 
|Defines whether to overwrite the output restart file or not. By default, the output restart is not overwritten
 
|Defines whether to overwrite the output restart file or not. By default, the output restart is not overwritten
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,827: Line 13,988:
 
|RICH_MLD
 
|RICH_MLD
 
|Ri used to compute the surface mixing length based on the Ri number.
 
|Ri used to compute the surface mixing length based on the Ri number.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,834: Line 13,998:
 
|STATISTICS_MLD
 
|STATISTICS_MLD
 
|Checks out if the user pretends to output statics for the surface mixing length (1) or not (0).
 
|Checks out if the user pretends to output statics for the surface mixing length (1) or not (0).
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,841: Line 14,008:
 
|STATISTICS_MLD_FILE
 
|STATISTICS_MLD_FILE
 
|File name for output statistics of surface mixing length.
 
|File name for output statistics of surface mixing length.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,848: Line 14,018:
 
|TIME_SERIE
 
|TIME_SERIE
 
|Checks out if the user pretends to write time series of this property (1) or not (0).
 
|Checks out if the user pretends to write time series of this property (1) or not (0).
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,855: Line 14,028:
 
|TIME_SERIE_LOCATION
 
|TIME_SERIE_LOCATION
 
|Path to time serie location file
 
|Path to time serie location file
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,862: Line 14,038:
 
|TKE_MLD
 
|TKE_MLD
 
|TKE limit used to compute the surface mixing length based on the TKE.
 
|TKE limit used to compute the surface mixing length based on the TKE.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,869: Line 14,048:
 
|VISCOSITY_H
 
|VISCOSITY_H
 
|Default horizontal viscosity.
 
|Default horizontal viscosity.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,876: Line 14,058:
 
|VISCOSITY_V
 
|VISCOSITY_V
 
|Default vertical viscosity.
 
|Default vertical viscosity.
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,884: Line 14,069:
 
|Horizontal viscosity used as the minimum value for viscosity if MODVISH is either "estuary" or
 
|Horizontal viscosity used as the minimum value for viscosity if MODVISH is either "estuary" or
 
"smagorinsky".
 
"smagorinsky".
 +
|
 +
|
 +
|
 
|
 
|
 
|
 
|
Line 12,922: Line 14,110:
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="5" |Water
|WaterProperties
+
| rowspan="5" |WaterProperties
 
| rowspan="5" |ADV_METHOD_H
 
| rowspan="5" |ADV_METHOD_H
 
| rowspan="5" |Horizontal advection discretization.
 
| rowspan="5" |Horizontal advection discretization.
 
|1
 
|1
 
|UpwindOrder1
 
|UpwindOrder1
|
+
| rowspan="5" |
|
+
| rowspan="5" |
|
+
| rowspan="5" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|2
 
|2
 
|UpwindOrder2
 
|UpwindOrder2
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|3
 
|3
 
|UpwindOrder3
 
|UpwindOrder3
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|4
 
|4
 
|P2_TVD
 
|P2_TVD
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|5
 
|5
 
|CentralDif
 
|CentralDif
|
 
|
 
|
 
 
|-
 
|-
| Water
+
| rowspan="5" |Water
|WaterProperties
+
| rowspan="5" |WaterProperties
 
| rowspan="5" |ADV_METHOD_V
 
| rowspan="5" |ADV_METHOD_V
 
| rowspan="5" |Vertical advection discretization.
 
| rowspan="5" |Vertical advection discretization.
 
|1
 
|1
 
|UpwindOrder1
 
|UpwindOrder1
|
+
| rowspan="5" |
|
+
| rowspan="5" |
|
+
| rowspan="5" |
 
|-
 
|-
| Water
 
|WaterProperties.
 
 
|2
 
|2
 
|UpwindOrder2
 
|UpwindOrder2
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|3
 
|3
 
|UpwindOrder3
 
|UpwindOrder3
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|4
 
|4
 
|P2_TVD
 
|P2_TVD
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|5
 
|5
 
|CentralDif
 
|CentralDif
|
 
|
 
|
 
 
|-
 
|-
 
| Water
 
| Water
Line 13,016: Line 14,164:
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|WaterProperties
+
| rowspan="2" |WaterProperties
 
| rowspan="2" |ADVECTION_H_IMP_EXP
 
| rowspan="2" |ADVECTION_H_IMP_EXP
 
| rowspan="2" |Horizontal advection computed using a implicit/explicit discretization for this property.
 
| rowspan="2" |Horizontal advection computed using a implicit/explicit discretization for this property.
 
|0
 
|0
 
|Implicit discretization
 
|Implicit discretization
|
+
| rowspan="2" |
|
+
| rowspan="2" |
|
+
| rowspan="2" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|1
 
|1
 
|Explicit discretization
 
|Explicit discretization
|
 
|
 
|
 
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|WaterProperties
+
| rowspan="2" |WaterProperties
 
| rowspan="2" |ADVECTION_V_IMP_EXP
 
| rowspan="2" |ADVECTION_V_IMP_EXP
 
| rowspan="2" |Vertical advection computed using a implicit/explicit discretization for this property.
 
| rowspan="2" |Vertical advection computed using a implicit/explicit discretization for this property.
 
|0
 
|0
 
|Implicit discretization.
 
|Implicit discretization.
|
+
| rowspan="2" |
|
+
| rowspan="2" |
|
+
| rowspan="2" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|1
 
|1
 
|Explicit discretization.
 
|Explicit discretization.
|
 
|
 
|
 
 
|-
 
|-
 
| Water
 
| Water
Line 13,082: Line 14,220:
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="8" |Water
|WaterProperties
+
| rowspan="8" |WaterProperties
| rowspan="7" |BOUNDARY_CONDITION
+
| rowspan="8" |BOUNDARY_CONDITION
| rowspan="7" |Boundary condition for this property.
+
| rowspan="8" |Boundary condition for this property.
 
|1
 
|1
 
|MassConservation
 
|MassConservation
|
+
| rowspan="8" |
|
+
| rowspan="8" |
|
+
| rowspan="8" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|2
 
|2
 
|ImposedValue
 
|ImposedValue
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|3
 
|3
 
|VerticalDiffusion
 
|VerticalDiffusion
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|4
 
|4
 
|NullGradient
 
|NullGradient
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|5
 
|5
 
|SubModel
 
|SubModel
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|6
 
|6
 
|Orlanski
 
|Orlanski
|
 
|
 
|
 
 
|-
 
|-
| Water
+
|7
|WaterProperties
+
|MassConservation + NullGradient
 +
|-
 
|8
 
|8
 
|CyclicBoundary
 
|CyclicBoundary
|
 
|
 
|
 
 
|-
 
|-
| Water
+
| rowspan="2" |Water
|WaterProperties
+
| rowspan="2" |WaterProperties
 
| rowspan="2" |BOUNDARY_INITIALIZATION
 
| rowspan="2" |BOUNDARY_INITIALIZATION
 
| rowspan="2" |Processes considered to initialize the boundary values of this property
 
| rowspan="2" |Processes considered to initialize the boundary values of this property
 
|EXTERIOR  
 
|EXTERIOR  
 
|A value exterior to the domain is be imposed (a constant value).
 
|A value exterior to the domain is be imposed (a constant value).
|
+
| rowspan="2" |
|
+
| rowspan="2" |
|
+
| rowspan="2" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|INTERIOR  
 
|INTERIOR  
 
|Boundaries equal to the values given  
 
|Boundaries equal to the values given  
 
in the same cells during the domain initialization.
 
in the same cells during the domain initialization.
|
 
|
 
|
 
 
|-
 
|-
 
| Water
 
| Water
Line 13,219: Line 14,325:
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="5" |Water
|WaterProperties
+
| rowspan="5" |WaterProperties
 
| rowspan="5" |DENSITY_METHOD
 
| rowspan="5" |DENSITY_METHOD
 
| rowspan="5" |Method to compute water density
 
| rowspan="5" |Method to compute water density
 
|1
 
|1
 
|Leendertse
 
|Leendertse
|
+
| rowspan="5" |
|
+
| rowspan="5" |
|
+
| rowspan="5" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|2
 
|2
 
|UNESCO (''in situ'' temperature)
 
|UNESCO (''in situ'' temperature)
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|3
 
|3
 
|Linear
 
|Linear
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|4
 
|4
 
|Mellor 1996
 
|Mellor 1996
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|5
 
|5
 
|Jackett and McDougall 1995
 
|Jackett and McDougall 1995
|
 
|
 
|
 
 
|-
 
|-
 
| Water
 
| Water
Line 13,270: Line 14,356:
 
|
 
|
 
|
 
|
 +
|-
 +
| rowspan="2" |Water
 +
| rowspan="2" |WaterProperties
 +
| rowspan="2" |DIFFUSION_V_IMP_EXP
 +
| rowspan="2" |Vertical diffusion computed using a implicit/explicit discretization for this property.
 +
|0
 +
|Implicit discretization.
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
| rowspan="2" |
 +
|-
 +
|1
 +
|Explicit discretization.
 
|-
 
|-
 
| Water
 
| Water
 
|WaterProperties
 
|WaterProperties
|DESCRIPTION
+
|DISCHARGES
|Rate description ex: zooplankton grazing over phytoplankton
+
|Property is discharged.
 
|
 
|
 
|
 
|
Line 13,283: Line 14,382:
 
| Water
 
| Water
 
|WaterProperties
 
|WaterProperties
| rowspan="2" |DIFFUSION_V_IMP_EXP
+
|DISCHARGES_TRACKING
| rowspan="2" |Vertical diffusion computed using a implicit/explicit discretization for this property.
 
|0
 
|Implicit discretization.
 
|
 
|
 
|
 
|-
 
| Water
 
|WaterProperties
 
|1
 
|Explicit discretization.
 
|
 
|
 
|
 
|-
 
| Water
 
|WaterProperties
 
|DISCHARGES
 
|Property is discharged.
 
|
 
|
 
|
 
|
 
|
 
|-
 
| Water
 
|WaterProperties
 
|DISCHARGES_TRACKING
 
 
|This property writes discharges as time serie
 
|This property writes discharges as time serie
 
|
 
|
Line 13,319: Line 14,390:
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="3" |Water
|WaterProperties
+
| rowspan="3" |WaterProperties
 
| rowspan="3" |DOSAT_TYPE
 
| rowspan="3" |DOSAT_TYPE
 
| rowspan="3" |Method to compute dissolved oxygen saturation
 
| rowspan="3" |Method to compute dissolved oxygen saturation
 
|1
 
|1
 
|Apha
 
|Apha
|
+
| rowspan="3" |
|
+
| rowspan="3" |
|
+
| rowspan="3" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|2
 
|2
 
|Henry
 
|Henry
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|3
 
|3
 
|Mortimer
 
|Mortimer
|
 
|
 
|
 
 
|-
 
|-
 
| Water
 
| Water
Line 13,746: Line 14,807:
 
|
 
|
 
|
 
|
 +
|-
 +
| Water
 +
|WaterProperties
 +
|SIMPLE_OUTPUT
 +
|HDF outputs include only the basic properties
 +
|0/1
 +
|Inactive/Active
 +
|1
 +
|
 +
|Boolean
 +
|-
 +
| Water
 +
|WaterProperties
 +
|SIMPLE_WINDOW_OUTPUT
 +
|HDF window outputs include only the basic properties
 +
|0/1
 +
|Inactive/Active
 +
|1
 +
|
 +
|Boolean
 
|-
 
|-
 
| Water
 
| Water
Line 13,845: Line 14,926:
 
|
 
|
 
|-
 
|-
| Water
+
| rowspan="5" |Water
|WaterProperties
+
| rowspan="5" |WaterProperties
 
| rowspan="5" |TVD_LIMIT_H
 
| rowspan="5" |TVD_LIMIT_H
 
| rowspan="5" |Horizontal TVD limitation
 
| rowspan="5" |Horizontal TVD limitation
 
|1
 
|1
 
|MinMod
 
|MinMod
|
+
| rowspan="5" |
|
+
| rowspan="5" |
|
+
| rowspan="5" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|2
 
|2
 
|VanLeer
 
|VanLeer
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|3
 
|3
 
|Muscl
 
|Muscl
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|4
 
|4
 
|Superbee
 
|Superbee
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|5
 
|5
 
|PDM
 
|PDM
|
 
|
 
|
 
 
|-
 
|-
| Water
+
| rowspan="5" |Water
|WaterProperties
+
| rowspan="5" |WaterProperties
 
| rowspan="5" |TVD_LIMIT_V
 
| rowspan="5" |TVD_LIMIT_V
 
| rowspan="5" |Vertical TVD limitation
 
| rowspan="5" |Vertical TVD limitation
 
|1
 
|1
 
|MinMod
 
|MinMod
|
+
| rowspan="5" |
|
+
| rowspan="5" |
|
+
| rowspan="5" |
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|2
 
|2
 
|VanLeer
 
|VanLeer
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|3
 
|3
 
|Muscl
 
|Muscl
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|4
 
|4
 
|Superbee
 
|Superbee
|
 
|
 
|
 
 
|-
 
|-
| Water
 
|WaterProperties
 
 
|5
 
|5
 
|PDM
 
|PDM
|
 
|
 
|
 
 
|-
 
|-
 
| Water
 
| Water

Latest revision as of 16:31, 21 February 2020

MOHID Base 1

Module Benthos

Source Code

Keyword Keyword description Options Option description Default Value Units Type
BIOSI_DECAY_RATE Biogenic silica dissolution rate
DIATOMS Compute diatoms mortality
DIATOMS_MORTALITY Diatoms mortality rate when deposited
DIATOMS_NC_RATIO Diatoms Nitrogen/Carbon ratio
DIATOMS_PC_RATIO Diatoms Phosphorus/Carbon ratio
DIATOMS_SIC_RATIO Diatoms Silica/Carbon ratio
DT Time step to compute benthic biogeochemical processes
MIN_OXYGEN Minimum oxygen concentration for mineralization to occur
NC_RATIO Nitrogen/Carbon ratio of organic matter
NITROGEN Compute nitrogen processes
OXYGEN Compute oxygen processes
PC_RATIO Phosphorus/Carbon ratio of organic matter
PELAGIC_MODEL Pelagic model name to which Module Benthos will be coupled LifeModel
WaterQuality
PHOSPHORUS Compute phosphorus processes
PHYTO Compute phytoplankton mortality
PHYTO_MORTALITY Phytoplankton mortality rate when deposited
PHYTO_NC_RATIO Phytoplankton Nitrogen/Carbon ratio
PHYTO_PC_RATIO Phytoplankton Nitrogen/Carbon ratio
PON_DECAY_RATE Particulate organic nitrogen mineralization rate
PON_DECAY_TFACTOR Particulate Organic Nitrogen temperature influence factor in mineralization Rate
POP_DECAY_RATE Particulate organic phosphorus mineralization rate
POP_DECAY_TFACTOR Particulate Organic Phosphorus temperature influence factor in mineralization Rate
SILICA

Module CEQUALW2

Source Code

Project Module Keyword Keyword description Options Option description Default Value Units Type
Base 1 CEQUALW2 DTSECONDS time step, in seconds, between two CEQUALW2 calls
Base 1 CEQUALW2 NAME Algae Property name as defined on Module GlobalData

Module Discharges

Source Code

Project Module Keyword Keyword description Options Option description Default Value Units Type
Base 1 Discharges ALTERNATIVE_LOCATIONS Activates the automatic search for alternative locations, when the discharge point is not a covered point 0/1 Inactive/Active 0 Boolean
Base 1 Discharges COORD_X Longitude of the discharge in geographic coordinates Real
Base 1 Discharges COORD_Y Activates the automatic search for alternative locations, when the discharge point is not a covered point Latitude of the discharge in geographic coordinates Real
Base 1 Discharges CREST_HEIGTH Crest Height. Parameter needed in the case of the option FLOW_OVER is active (spill flow).
Base 1 Discharges DATA_BASE_FILE Definition of the data base time series file. If there is one, model assumes that the discharge is time variable
Base 1 Discharges DEFAULT_FLOW_VALUE Default flow value
Base 1 Discharges DEFAULT_VELOCITY_VALUE Default velocity associated with the discharge. Important to compute momentum fluxes
Base 1 Discharges DEFAULTVALUE Water property value
Base 1 Discharges DESCRIPTION Discharge description
Base 1 Discharges FLOW_COLUMN Column where the flow is defined in the data base time series file
Base 1 Discharges FLOW_DISTRIBUTION Chooses the hydrodynamic approximation to be solved in the momentum equation by cell
by water column
by volume
Base 1 Discharges FLOW_OVER Computes a negative discharge, function of the water level, also known as spill flow
Base 1 Discharges IGNORE_ON This keyword must be active for MOHID MPI runs 0/1 Inactive/Active 0 Boolean
Base 1 Discharges I_CELL Line where the discharge is located. When defined, a grid-based discharged is assumed Integer
Base 1 Discharges J_CELL Column where the discharge is located Integer
Base 1 Discharges K_CELL Layer where the discharge is located Integer
Base 1 Discharges NAME Discharge name
Base 1 Discharges NODE_ID ID of the discharge, when it isn't grid-based
Base 1 Discharges TIME_SERIE_COLUMN This keyword is used to give to the model the column where the water property associated with this sub-block is defined in the time series.
Base 1 Discharges U_COLUMN This keyword is used to give to model the column where the velocity X is defined in the data base time series file
Base 1 Discharges V_COLUMN This keyword is used to give to model the column where the velocity Y is defined in the data base time series file
Base 1 Discharges WEIR_COEF Weir Coefficient. Parameter needed in the case of the option FLOW_OVER is active (spill flow).
Base 1 Discharges WEIR_LENGTH Weir Length. Parameter needed in the case of the option FLOW_OVER is active (spill flow).

Module DrainageNetwork

Source Code

Project Module Keyword Keyword description Options Option description Default Value Units Type
Base 1 DrainageNetwork ADVECTION_DIFUSION Compute advection and diffusion of property
Base 1 DrainageNetwork ADVECTION_SCHEME Numerical Discretization of Advection. 1 UpwindOrder1 (Upwind scheme of 1st order)
5 CentralDif (Central differences scheme)
Base 1 DrainageNetwork CHECK_NODES Check nodes consistency in the drainage network file
Base 1 DrainageNetwork CHECK_REACHES Check reaches consistency in the drainage network file (a reach connects 2 nodes)
Base 1 DrainageNetwork CONTINUOUS Computations follow from another simulation
Base 1 DrainageNetwork DATA_COLUMN Number of column in the time series file with the downstream water depth values
Base 1 DrainageNetwork DEFAULT_VALUE Default value for water depth at the downstream boundary condition
Base 1 DrainageNetwork DEFAULT_VALUE Default value for this property. Also used as initial value.
Base 1 DrainageNetwork DESCRIPTION Description of property
Base 1 DrainageNetwork DIFFUSION_SCHEME Numerical Discretization of Diffusion. 5 CentralDif (Central Differences discretization)
Base 1 DrainageNetwork DIFFUSIVITY Diffusivity of property
Base 1 DrainageNetwork DISCHARGES Use module discharges
Base 1 DrainageNetwork DOWNSTREAM_BOUNDARY Choose downstream boundary condition 0 Dam (flow at the outlet = 0.0)
1 Normal (solves KynematicWave at the outlet)
2 ImposedWaterDepth
3 ImposedWaterLevel
4 ImposedVelocity
Base 1 DrainageNetwork FILE_IN_TIME Downstream boundary condition evolution NONE Constant evolution of downstream boundary condition (constant water depth)
TIMESERIE Reads a time series with water depth for downstream boundary condition
Base 1 DrainageNetwork FILENAME Path to the file with the downstream water depth time serie values
Base 1 DrainageNetwork GLOBAL_MANNING Assigns a Manning rugosity coefficient to all the drainage network channels
Base 1 DrainageNetwork HYDRODYNAMIC_APROX Chooses the hydrodynamic approximation to be solved in the momentum equation 1 KinematicWave (friction = slope gradient)
2 DiffusionWave (full St Venant equation except for advection)
3 DynamicWave (full St Venant equation)
Base 1 DrainageNetwork INITIAL_WATER_DEPTH Assigns an initial water depth to all channels. only if continuous computation is not chosen.
Base 1 DrainageNetwork INITIALIZATION_METHOD Choose initialization method for this property. CONSTANT Constant initialization of property
Base 1 DrainageNetwork MIN_VALUE Minimum concentration of property.
Base 1 DrainageNetwork MIN_WATER_DEPTH Minimum water column for computations
Base 1 DrainageNetwork NAME Name of property
Base 1 DrainageNetwork NETWORK_FILE Path to the file that describes nodes and reaches
Base 1 DrainageNetwork TIME_SERIE Output of property values in time series files.
Base 1 DrainageNetwork TIME_SERIE_LOCATION Path to the file that has the time series location characteristics
Base 1 DrainageNetwork UNITS Units of property
Base 1 DrainageNetwork XS_CALC Method to compute trapezoidal cross section 1 Analytic
2 Discretization dH

Module Life

Source Code

Project Module Keyword Keyword description Options Option description Default Value Units Type
Base 1 Life AFFINITY_NH4 Affinity for NH4 uptake
Base 1 Life AFFINITY_NO3 Affinity for NO3 uptake
Base 1 Life AFFINITY_PO4 Affinity for PO4 uptake
Base 1 Life ALPHA_CHL Chl specific initial slop of P vs I curve
Base 1 Life ASS_EFFIC Assimilation efficiency
Base 1 Life ASS_EFFIC_LOW_O2 Assimilation efficiency @ low O2
Base 1 Life ASSIMIL_EFFIC Assimilation efficiency
Base 1 Life BIO_SI_DISS Biogenic silica dissolution rate
Base 1 Life CHL_DEGRAD_RATE Chla degradation rate constant
Base 1 Life DENS_DEP_MORT Density-dependence mortality rate
Base 1 Life DOM_UP_KS Half saturation value for DOM uptake
Base 1 Life DOMSL_BAC_KS Bacteria mediated DOMsl Hydrolysis
Base 1 Life DOMSL_BAC_VMAX Vmax for DOMsl Hydrolysis
Base 1 Life EXC_DOM_SL_FRAC DOM diverted to semi-labile pool
Base 1 Life EXCRE_UP_FRAC Excreted fraction of uptake
Base 1 Life EXU_NUT_STRESS Exudation under nutrient stress
Base 1 Life GRAZ_AVAIL Availability of Prey X
Base 1 Life GRAZ_UP_KS Half saturation value for uptake
Base 1 Life LIGHT_LIM_METHOD Light limitation method
Base 1 Life LYS_REF_CON Lysis_Ref_Con
Base 1 Life MASS_XEK Command to make a mass conservation test
Base 1 Life MAX_ASSIMIL Maximal assimilation rate
Base 1 Life MAX_CHLN_RATIO Maximal Chl:N ratio
Base 1 Life MAX_NC_RATIO Maximal N:C ratio
Base 1 Life MAX_PC_RATIO Maximal P:C ratio
Base 1 Life MAX_SPEC_UP_@10C Maximum specific uptake @ 10ºC
Base 1 Life MAX_STORE_FILL Maximal rate of storage filling
Base 1 Life MIN_LYSIS Minimal lysis rate
Base 1 Life MIN_NC_RATIO Minimal N:C ratio
Base 1 Life MIN_PC_RATIO Minimal P:C ratio
Base 1 Life MIXOTROPHY Hability to perform mixotrophy
Base 1 Life MORT_DOM_SL_FRAC DOC_SL_Frac
Base 1 Life MORT_O2_DEP Oxygen-dependent mortality rate
Base 1 Life MORT_POM_FRAC Fraction of mortality to POM
Base 1 Life MORT_RATE Temperature-independent mortality rate
Base 1 Life NH4_Ks PO4 uptake affinity
Base 1 Life NIT_IN_COEF Nitrification inhibition coefficient
Base 1 Life NIT_O_N_CONV Nitrification O:N consumption ratio
Base 1 Life NITRIFRADLIM Light radiation bellow which nitrification occurs
Base 1 Life NITRIFRATE Nitrification rate
Base 1 Life NO3_Ks NO3 uptake affinity
Base 1 Life NUT_STRESS_TRESHOLD Nutrient stress threshold (sedimentation)
Base 1 Life O2_CARB_CONVERS Oxygen to carbon conversion factor
Base 1 Life O2_KS Oxygen half saturation constant
Base 1 Life O2_LOW_ASS_EFIC Oxygen concentration bollow which ass efic is low
Base 1 Life PHOTOINHIBITION Photoinhibition
Base 1 Life PO4_Ks PO4 uptake affinity
Base 1 Life POM_BAC_KS Bacteria mediated POM Hydrolysis MM constant
Base 1 Life POM_BAC_VMAX Vmax for POM Hydrolysis
Base 1 Life Q10_VALUE Q10 value for temperature limitation
Base 1 Life REDFIELD_NC Redfield N:C ratio
Base 1 Life REDFIELD_PC Redfield P:C ratio
Base 1 Life REDFIELD_SiC Standard Si:C ratio
Base 1 Life REF_TEMP Reference temperature
Base 1 Life REF_TEMP_Q10 Reference temperature for Q10 method
Base 1 Life REL_EXCESS_SI Release rate of excess silicate
Base 1 Life RESP_BASAL Basal respiration rate
Base 1 Life RESP_FRAC_PROD Respired fraction of production
Base 1 Life REST_RESP_@10C Rest respiration @ 10ºC
Base 1 Life SED_MIN Minimal sedimentation rate
Base 1 Life SED_NUT_STRESS Nutrient stress sedimentation rate
Base 1 Life SEDIM_MIN Minimal sedimentation rate
Base 1 Life SEDIM_NUT_STRESS Nutrient stress threshold (sedimentation)
Base 1 Life SI_UPTAKE_KS Silicate uptake Michaelis constant
Base 1 Life SILICA_USE Set Silica use by the producer
Base 1 Life TEMP_LIM_METHOD Temperature limitation method

Module LightExtinction

Source Code

Project Module Keyword Keyword description Options Option description Default Value Units Type
Base 1 LightExtinction COEF_PARSONS_PORTELA Correct Default Coefficient for Parsons Portela SW Radiation parameterisation Needs SW_EXTINCTION_TYPE: 4 0.04 Real
Base 1 LightExtinction LW_EXTINCTION_COEF Long-wave extinction coeficient 0.333
Base 1 LightExtinction LW_EXTINCTION_COLUMN
Base 1 LightExtinction LW_EXTINCTION_TYPE The method used in light extinction estimate 1 Constant 1
5 Ascii file
Base 1 LightExtinction LW_PERCENTAGE 0.4
Base 1 LightExtinction SW_EXTINCTION_COEF Short-wave extinction coeficient 0.05 Real
Base 1 LightExtinction SW_EXTINCTION_COLUMN
Base 1 LightExtinction SW_EXTINCTION_TYPE The method used in light extinction estimate 1 Constant 1
2 Parsons Ocean
3 Portela-Tagus Estuary
4 Combined Parsons-Portela
5 Ascii file
6 Multiparameter
Base 1 LightExtinction SW_KW Short wave absorption coefficient
Base 1 LightExtinction SW_LW_EXTINCTION_FILE
Base 1 LightExtinction SW_PERCENTAGE 0.6

Module MacroAlgae

Source Code

Project Module Keyword Keyword description Options Option description Default Value Units Type
Base 1 MacroAlgae BEACHED_MORT_RATE Beached drifting macroalgae mortality rate
Base 1 MacroAlgae DEPLIM Maximum SPM deposition flux allowed for macroalgae to grow
Base 1 MacroAlgae DISSDON fraction of dissolved organic material excreted by macroalgae
Base 1 MacroAlgae DT Time step compute macroalgae biogeochemical processes
Base 1 MacroAlgae ENDREPC Macroalgae endogenous respiration rate
Base 1 MacroAlgae EROCRITSS Critical shear stress for macroalgae detachment to occur
Base 1 MacroAlgae EXCRCONS Macroalgae excretion rate
Base 1 MacroAlgae GRAZCONS Grazing rate over macroalgae
Base 1 MacroAlgae GROWMAX macroalgae maximum growth rate
Base 1 MacroAlgae MACROALGAE_MINCONC Minimum residual value for macroalgae abundance
Base 1 MacroAlgae MIN_OXYGEN Minimum oxygen concentration for macroalgae growth
Base 1 MacroAlgae MORTCON Macroalgae mortality half saturation constant
Base 1 MacroAlgae MORTMAX Macroalgae natural mortality rate
Base 1 MacroAlgae NITROGEN Defines if the user wishes to compute the nitrogen cycle
Base 1 MacroAlgae NSATCONS nitrogen half-saturation constant for macroalgae
Base 1 MacroAlgae PELAGIC_MODEL Pelagic biogeochemical module coupled
Base 1 MacroAlgae PHOSPHORUS Defines if the user wishes to compute the phosphorus cycle
Base 1 MacroAlgae PHOTOIN macroalgae optimum radiation value
Base 1 MacroAlgae PHOTORES Macroalgae photorespiration rate
Base 1 MacroAlgae PSATCONS phosphorus half-saturation constant for macroalgae
Base 1 MacroAlgae RATIONC Macroalgae nitrogen/carbon ratio
Base 1 MacroAlgae RATIOPC Macroalgae phosphorus/carbon ratio
Base 1 MacroAlgae SALT_EFFECT Include salinity limitation on macroalgae growth
Base 1 MacroAlgae SALTCRIT Macroalgae critical salinity limit growth
Base 1 MacroAlgae SALTMAX Macroalgae maximum salinity for growth
Base 1 MacroAlgae SALTMIN Macroalgae minimum salinity for growth
Base 1 MacroAlgae SALTOPT Macroalgae optimum salinity for growth
Base 1 MacroAlgae SOLEXCR Fraction of soluble inorganic material excreted by macroalgae
Base 1 MacroAlgae TCONST1 Constant to control temperature response curve shape
Base 1 MacroAlgae TCONST2 Constant to control temperature response curve shape
Base 1 MacroAlgae TCONST3 Constant to control temperature response curve shape
Base 1 MacroAlgae TCONST4 Constant to control temperature response curve shape
Base 1 MacroAlgae TMIN Macroalgae minimum temperature for growth
Base 1 MacroAlgae TOPTMAX Macroalgae optimum maximum temperature for growth
Base 1 MacroAlgae TOPTMIN Macroalgae optimum minimum temperature for growth

Module Profile

Source Code

Project Module Keyword Keyword description Options Option description Default Value Units Type
Base 1 Profile DT_OUTPUT_TIME Time step to perform profile outputs in HDF5
Base 1 Profile LOCALIZATION_I Grid cell index I where to perform profile output
Base 1 Profile LOCALIZATION_J Grid cell index J where to perform profile output
Base 1 Profile NAME Name of profile output

Module SedimentQuality

Source Code

Project Module Keyword Keyword description Options Option description Default Value Units Type
Base 1 SedimentQuality Acoef Coefficient for labile OM decay rate
Base 1 SedimentQuality Acoef Acoef for Heterotrophs decay rate
Base 1 SedimentQuality Acoef Acoef for Autotrophs C specific decay (death) Rate
Base 1 SedimentQuality Acoef Acoef for the Anaerobic C specific decay (death) Rate
Base 1 SedimentQuality Acoef Calculates the AmmoniaToNitrate (nitrification) specific Rate
Base 1 SedimentQuality Acoef A coef for the AmmoniaImobilization specific Rate
Base 1 SedimentQuality Acoef Acoef for for the NitrateToNgas specific Rate (denitrification)
Base 1 SedimentQuality Acoef Acoef for the NitrateImobilization specific Rate
Base 1 SedimentQuality ActivationE Activation Energy for labil organic mater carbon decay rate
Base 1 SedimentQuality ActivationE Coeficient for refractory OM decay rate
Base 1 SedimentQuality ActivationE AE for Heterotrophs decay rate
Base 1 SedimentQuality ActivationE AE activation energy for the Autotrophs C specific decay (death) Rate
Base 1 SedimentQuality ActivationE AE for the Anaerobic C specific decay (death) Rate
Base 1 SedimentQuality ActivationE Calculates the AmmoniaT