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Mohid Bibliography

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Journal Papers

Beckers PM, Neves RJ. A semi-implicit tidal model of the North European Continental Shelf.Applied Mathematical Modelling. 1985; 9(6):395-402. Available at: http://dx.doi.org/10.1016/0307-904X(85)90104-0.

Braunschweig F, Martins F, Chambel P, Neves R. A methodology to estimate renewal time scales in estuaries: the Tagus Estuary case. Ocean Dynamics. 2003;53(3):137-145. Available at: http://www.springerlink.com/openurl.asp?genre=article&id=doi:10.1007/s10236-003-0040-0.

Cancino L, Neves R. Hydrodynamic and sediment suspension modelling in estuarine systems Part I: Description of the numerical models. Journal of Marine Systems. 1999;22(2-3):105-116. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0924796399000354.

Cancino L, Neves R. Hydrodynamic and sediment suspension modelling in estuarine systems Part II: Application to the Western Scheldt and Gironde estuaries. Journal of Marine Systems. 1999;22(2-3):117-131. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0924796399000366.

Carracedo P, Torres-López S, Barreiro M, et al. Improvement of pollutant drift forecast system applied to the Prestige oil spills in Galicia Coast (NW of Spain): development of an operational system. Marine pollution bulletin. 2006;53(5-7):350-360. Available at: http://dx.doi.org/10.1016/j.marpolbul.2005.11.014.

Coelho HS, Neves RR, Leitão PC, Martins H, Santos AP. The slope current along the western European margin : A numerical investigation. Bol. Inst. Esp. Oceanogr. 1999;15(1-4):61-72.

Coelho H, Neves R, White M, Leitao P, Santos A. A model for ocean circulation on the Iberian coast. Journal of Marine Systems. 2002;32(1-3):153-179. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0924796302000325.

deCastro M, Gómez-Gesteira M, Alvarez I, Prego R. Negative estuarine circulation in the Ria of Pontevedra (NW Spain). Estuarine, Coastal and Shelf Science. 2004;60(2):301-312. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0272771404000228.

deCastro M, Gómez-Gesteira M, Prego R, Neves R. Wind influence on water exchange between the ria of Ferrol (NW Spain) and the shelf. Estuarine, Coastal and Shelf Science. 2003;56(5-6):1055-1064. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0272771402003025.

Genio L, Sousa a, Vaz N, Dias J, Barroso C. Effect of low salinity on the survival of recently hatched veliger of Nassarius reticulatus (L.) in estuarine habitats: A case study of Ria de Aveiro. Journal of Sea Research. 2008;59(3):133-143. Available at: http://linkinghub.elsevier.com/retrieve/pii/S1385110107000986.

Gómez-Gesteira M, Montero P, Prego R, et al. A two-dimensional particle tracking model for pollution dispersion in A Coruña and Vigo Rias (NW Spain). Oceanologica Acta. 1999;22:167-177. Available at: http://dx.doi.org/10.1016/S0399-1784(99)80043-7.

Huthnance J, Coelho H, Griffiths C, et al. Physical structures, advection and mixing in the region of Goban spur. Deep Sea Research Part II: Topical Studies in Oceanography. 2001;48(14-15):2979-3021. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0967064501000303.

Janeiro J, Fernandes E, Martins F, Fernandes R. Wind and freshwater influence over hydrocarbon dispersal on Patos Lagoon, Brazil. Marine pollution bulletin. 2008;56(4):650-65. Available at: http://dx.doi.org/10.1016/j.marpolbul.2008.01.011.

Leitão P, Coelho H, Santos a, Neves R. Modelling the main features of the Algarve coastal circulation during July 2004: A downscaling approach. Journal of Atmospheric & Ocean Science. 2005;10(4):421-462. Available at: http://www.informaworld.com/openurl?genre=article&doi=10.1080/17417530601127704&magic=crossref%7C%7CD404A21C5BB053405B1A640AFFD44AE3.

Malhadas MS, Leitão PC, Silva A, Neves R. Effect of coastal waves on sea level in Óbidos Lagoon, Portugal. Continental Shelf Research. 2009;29(9):1240-1250. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0278434309000739.

Malhadas MS, Neves RJ, Leitão PC, Silva A. Influence of tide and waves on water renewal in Óbidos Lagoon, Portugal. Ocean Dynamics. 2009;60(1):41-55. Available at: http://www.springerlink.com/index/10.1007/s10236-009-0240-3.

Malhadas MS, Silva A, Leitão PC, Neves R. Effect of the Bathymetric Changes on the Hydrodynamic and Residence Time in Óbidos Lagoon (Portugal). Journal of Coastal Research. 2009;SI(56):549-553. Available at: http://e-geo.fcsh.unl.pt/ICS2009/_docs/ICS2009_Volume_I/549.553_M.S.Malhadas_ICS2009.pdf.

Marín VH, Campuzano FJ. Un modelo hidrodinámico-barotrópico para los fiordos australes de Chile entre los 41° S y los 46° S. Ciencia y Tecnología del Mar. 2008;31(2): 125-136. Available at: http://redalyc.uaemex.mx/src/inicio/ArtPdfRed.jsp?iCve=62412167007. (Spanish).

Martins F, Leitão P, Neves R. Simulating vertical water mixing in homogeneous estuaries : the SADO Estuary case. Hydrobiologia. 2002;475/476:221-227. Available at: http://dx.doi.org/10.1023/A:1020369431924.

Martins F, Leitão P, Silva A, Neves R. 3D modelling in the Sado estuary using a new generic vertical discretization approach. Oceanologica Acta. 2001;24(Supplement 1):51-62. Available at: http://dx.doi.org/10.1016/S0399-1784(01)00092-5.

Mateus M, Neves R. Evaluating light and nutrient limitation in the Tagus estuary using a process-oriented ecological model. Journal of Marine Engineering and Technology. 2008;12A:43-54.

Miranda R, Leitão PC, Coelho HS, Martins H, Neves RR. Transport and mixing simulation along the continental shelf edge using a Lagrangian approach. Bol. Inst. Esp. Oceanogr. 1999;15(1-4):39-60.

Montero P, Gómez-Gesteira M, Taboada JJ, et al. On residual circulation of the Ria of Vigo, using a 3-D baroclinic model. Bol. Inst. Esp. Oceanogr. 1999;15(1-4):31-38. Available at: http://digital.csic.es/bitstream/10261/25134/1/15_031-038.pdf.

Nobre A, Ferreira J, Newton A, et al. Management of coastal eutrophication: Integration of field data, ecosystem-scale simulations and screening models. Journal of Marine Systems. 2005;56(3-4):375-390. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0924796305000400.

Portela LI, Neves R. Numerical modelling of suspended sediment transport in tidal estuaries: A comparison between the Tagus (Portugal) and the Scheldt (Belgium-the Netherlands). Netherlands Journal of Aquatic Ecology. 1994;28(3-4):329-335. Available at: http://www.springerlink.com/index/10.1007/BF02334201.

Ruiz-Villarreal M, Montero P, Taboada JJ, et al. Hydrodynamic model study of the Ria de Pontevedra under estuarine conditions. Estuarine, Coastal and Shelf Science. 2002;54(1):101-113. Available at: http://linkinghub.elsevier.com/retrieve/pii/S027277140190825X.

Santos A, Martins H, Coelho H, Leitão PC, Neves R. A circulation model for the European ocean margin. Applied Mathematical Modelling. 2002;26(5):563-582. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0307904X01000695.

Santos A, Nogueira J, Martins H. Survival of sardine larvae off the Atlantic Portuguese coast: a preliminary numerical study. ICES Journal of Marine Science. 2005;62(4):634-644. Available at: http://icesjms.oxfordjournals.org/cgi/doi/10.1016/j.icesjms.2005.02.007.

Saraiva S, Pina P, Martins F, et al. Modelling the influence of nutrient loads on Portuguese estuaries. Hydrobiologia. 2007;587(1):5-18. Available at: http://www.springerlink.com/index/10.1007/s10750-007-0675-9.

Taboada J. Evaluation of the Seasonal Variations in the Residual Circulation in the Ría of Vigo (NW Spain) by Means of a 3D Baroclinic Model. Estuarine, Coastal and Shelf Science. 1998;47(5):661-670. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0272771498903857.

Tironi A, Marin VH, Campuzano FJ. A management tool for assessing aquaculture environmental impacts in Chilean Patagonian Fjords: integrating hydrodynamic and pellets dispersion models. Environmental management. 2010;45(5):953-62. Available at: http://dx.doi.org/10.1007/s00267-010-9467-5

Trancoso AR, Braunschweig F, Chambel Leitão P, Obermann M, Neves R. An advanced modelling tool for simulating complex river systems. The Science of the total environment. 2009;407(8):3004-16. Available at: http://dx.doi.org/10.1016/j.scitotenv.2009.01.015.

Trancoso AR, Saraiva S, Fernandes L, et al. Modelling macroalgae using a 3D hydrodynamic-ecological model in a shallow, temperate estuary. Ecological Modelling. 2005;187(2-3):232-246. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0304380005000918.

Tzoraki O, Nikolaidis NP, Trancoso R. A reach-scale biogeochemical model for temporary rivers. Hydrological Processes. 2009;23(2):272-283. Available at: http://dx.doi.org/10.1002/hyp.7138.

Vaz N, Dias JM, Leitão P, Martins I. Horizontal patterns of water temperature and salinity in an estuarine tidal channel: Ria de Aveiro. Ocean Dynamics. 2005;55(5-6):416-429. Available at: http://www.springerlink.com/index/10.1007/s10236-005-0015-4.

Vaz N, Dias JM, Leitão PC, Nolasco R. Application of the Mohid-2D model to a mesotidal temperate coastal lagoon. Computers & Geosciences. 2007;33(9):1204-1209. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0098300407000763.

Vaz N, Dias JM, Leitão PC. Three-dimensional modelling of a tidal channel: The Espinheiro Channel (Portugal). Continental Shelf Research. 2009;29(1):29-41. Available at: http://linkinghub.elsevier.com/retrieve/pii/S0278434307003330.

Vaz N, Leitão PC, Dias JM. Channel-ocean exchange driven by tides and river flow: Espinheiro Channel (Portugal). Water. 2007;SI(50):1000-1004. Available at: http://www.griffith.edu.au/conference/ics2007/pdf/ICS182.pdf.

Viegas CN, Nunes S. Streams contribution on bathing water quality after rainfall events in Costa do Estoril- a tool to implement an alert system for bathing water quality. 2009;SI(56):1691-1695. Available at: http://e-geo.fcsh.unl.pt/ICS2009/_docs/ICS2009_Volume_II/1691.1695_C.Viegas_ICS2009.pdf.

Conference Proceedings

Ruiz-Villarreal M, Coelho H, Díaz G, Nogueira J. Slope current in the Cantabrian: Observations and modeling of seasonal variability and interaction with Aviles Canyon. ICES CM 2004/N:12. In: ICES CM.Vol 12. Nice (France).; 2004. Available at: http://www.ices.dk/products/CMdocs/2004/N/N1204.pdf.

Book Chapters

Campuzano, F.J., Leitão P.C., Gonçalves, M.I., Marín, V.H. and Tironi, A. (2008). Hydrodynamical vertical 2D model for the Aysén Fjord, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 555-566. [Download Complete Book]

Campuzano, F.J., Marín, V.H., Tironi, A. and Leitão P.C. (2008). Ecological conceptual model for a southern Chilean fjord: The Aysén Fjord case study, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 567-579. [Download Complete Book]

Campuzano, F.J., Pierini, J.O. and Leitão, P.C. (2008). Hydrodynamics and sediments in Bahía Blanca estuary: Data analysis and modelling, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 483-503. [Download Complete Book]

Mateus, M. and Campuzano, F.J. (2008). The DPSIR framework applied to the Integrated Management of Coastal Areas, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 29-42. [Download Complete Book]

Marín, V.H., Tironi, A., Paredes, M.A. and Campuzano, F. (2008). The estuarine system of the Aysén Fjord, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 333-339. [Download Complete Book]

Neves, R., Coelho, H., Taborda, R. and Pina, P. (2002). Physical processes and modelling at ocean margins, In: Ocean Margin Systems, Wefer, G., Billett, D., Hebbeln, D., Jørgensen, B.B., Schlüter, M., van Weering, T. (eds.) Springer-Verlag Berlin Heidelberg pp 99-124. Available at: [Google Books]

Pierini, J.O., Campuzano, F., Marcovecchio, J. and Perillo, G.M.E. (2008). The application of MOHID to assess the potential effect of sewage discharge system at Bahía Blanca estuary (Argentina), In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 515-522. [Download Complete Book]

Pierini, J.O., Marcovecchio, J., Campuzano, F. and Perillo, G.M.E. (2008). Evolution of salinity and temperature in Bahía Blanca estuary, Argentina, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 505-513. [Download Complete Book]

Pierini, J.O., Marcovecchio, J., Campuzano, F. and Perillo, G.M.E. (2008). MOHID oil spill in coastal zones: A case study in Bahía Blanca estuary (Argentina), In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 523-528. [Download Complete Book]

Tironi, A., Marin, V.H. and Campuzano, F. (2008). A management tool for salmon aquaculture: Integrating MOHID and GIS applications for local waste management, In: Perspectives on Integrated Coastal Zone Management in South America, R. Neves, J. Baretta & M. Mateus (eds.), IST Press. pp 585-595. [Download Complete Book]

Thesis

Antunes I (2000). Modelação Matemática da Qualidade da Água no Estuário do Tejo. MSc dissertation thesis. Technical University of Lisbon. [Download]

Barão L (2007). Carbon, Nitrogen and Phosphorus Soil Cycle Modeling. MSc dissertation thesis. Technical University of Lisbon. [Download]

Bernardes B (2007). Hydrodynamical and ecological modelling of the North Sea. MSc dissertation thesis. Technical University of Lisbon. [Download]

Braunschweig F (2001). Generalização de um modelo de circulação costeira para albufeiras. MSc dissertation thesis. Technical University of Lisbon. [Download]

Canas A (2009). Modelling and Data Assimilation Techniques for Operational Hydrodynamic Forecast in Tagus Estuary. PhD thesis. Technical University of Lisbon. [Download]

Coelho H (2002). Modelação de Processos Físicos Relacionados com a Circulação Oceânica na Margem Continental Ibérica. PhD thesis. Technical University of Lisbon. [Download]

Coelho H (1996).Modelação Numérica da Turbulência Oceânica. MSc dissertation thesis. Technical University of Lisbon.

de Clippele J (1998). Cohesive Sediment Transport in the Tagus Estuary. MSc dissertation thesis. Diplôme d’Etudes Approfondies Européen en Modélisation de l’Environnement Marin.

Duarte S (2001). Bactérias Marinhas, sua importância e efeitos no ciclo dos nutrientes - Modelo Ecológico. MSc dissertation thesis. Technical University of Lisbon. [Download]

Fernandes L (2005).Modelling of Arsenic Dynamics in the Tagus Estuary. MSc dissertation thesis. Technical University of Lisbon. [Download]

Fernandes R (2005). Modelação Operacional no Estuário do Tejo. MSc dissertation thesis. Technical University of Lisbon. [Download]

Fontes C L (2000). Modelação Matemática de Processos Diagenéticos. MSc dissertation thesis. Technical University of Lisbon. [Download]

Garcia A C (2008). Fine Sediments Resuspension Processes and transport in Nazaré Submarine Canyon. PhD thesis. Technical University of Lisbon. [Download]

Laran S (2000). A Theoretical Model of Pelagic Ecosystem and Nitrogen Waste in a Aquaculturing Pound. Application to the Rearing of sparus aurata L. and dicentrarchus labrax L. in the Sado Estuary (Portugal). MSc dissertation thesis. Université de Liège. [Download]

Leitão P C (2003). Integração de Escalas e de Processos na Modelação no Ambiente Marinho. PhD thesis. Technical University of Lisbon. [Download]

Leitão P C (1996). Modelo de Dispersão Lagrangeano Tridimensional. MSc dissertation thesis. Technical University of Lisbon.

Martins F A (2000). Modelação Matemática Tridimensional de Escoamentos Costeiros e Estuarinos usando uma abordagem de Coordenada Vertical Genérica. PhD thesis. Technical University of Lisbon. [Download]

Mateus M (1999). Modelação do Ciclo Biogeoquímico do Azoto na Zona do Cabo de S. Vicente. MSc dissertation thesis. Technical University of Lisbon. [Download]

Miranda R (1997). Nitrogen Biogeochemical Cycle Modeling In The North Atlantic Ocean. MSc dissertation thesis. Technical University of Lisbon.

Monteiro R (2001). Fish Growth Modelling - Growth of European anchovy (Engraulis encrasicolus) in the Tagus Estuary, Portugal. MSc dissertation thesis. Diplome D'Etudes Approfondies Europeen en Modelisation de L'Environment Marin. [Download]

Montero P (1999). Estudio de la hidrodinámica de la Ría de vigo mediante un modelo de volúmenes finitos. PhD thesis. Universidad de Santiago de Compostela. [Download]

Nogueira (2007). Estudo numérico do recrutamento de pequenos peixes pelágicos na Costa Ibérica. MSc dissertation thesis. Technical University of Lisbon. [Download]

Obermann M (2007). Nutrient dynamics in temporary waters of Mediterranean catchments. PhD thesis. University of Hannover. [Download]

Pina P (2001). An integrated approach to study the Tagus estuary water quality. MSc dissertation thesis. Technical University of Lisbon. [Download]

Ramos P (2002). Modelação matemática da qualidade da água no estuário do Tejo. MSc dissertation thesis. Technical University of Lisbon. [Download]

Rodrigues V (1997). Modelação Do Transporte E Dispersão De Constituintes Em Zonas Costeiras. MSc dissertation thesis. Technical University of Lisbon.

Ruiz-Villareal M (2000). Parameterization of turbulence in the ocean and application of a 3D model to the ria de Pontevedra. PhD thesis. Universidad de Santiago de Compostela. [Download]

Saraiva S (2005). Modelação Ecológica da Ria de Aveiro: o papel das macroalgas. MSc dissertation thesis. Technical University of Lisbon. [Download]

Silva A (1991). Modelação Matemática Não Linear de Ondas de Superfície e de Correntes Litorais. PhD thesis. Technical University of Lisbon.

Reports

Manuals